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Deep-UV excitation fluorescence microscopy for detection of lymph node metastasis using deep neural network

Deep-UV (DUV) excitation fluorescence microscopy has potential to provide rapid diagnosis with simple technique comparing to conventional histopathology based on hematoxylin and eosin (H&E) staining. We established a fluorescent staining protocol for DUV excitation fluorescence imaging that has...

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Autores principales: Matsumoto, Tatsuya, Niioka, Hirohiko, Kumamoto, Yasuaki, Sato, Junya, Inamori, Osamu, Nakao, Ryuta, Harada, Yoshinori, Konishi, Eiichi, Otsuji, Eigo, Tanaka, Hideo, Miyake, Jun, Takamatsu, Tetsuro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6858352/
https://www.ncbi.nlm.nih.gov/pubmed/31729459
http://dx.doi.org/10.1038/s41598-019-53405-w
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author Matsumoto, Tatsuya
Niioka, Hirohiko
Kumamoto, Yasuaki
Sato, Junya
Inamori, Osamu
Nakao, Ryuta
Harada, Yoshinori
Konishi, Eiichi
Otsuji, Eigo
Tanaka, Hideo
Miyake, Jun
Takamatsu, Tetsuro
author_facet Matsumoto, Tatsuya
Niioka, Hirohiko
Kumamoto, Yasuaki
Sato, Junya
Inamori, Osamu
Nakao, Ryuta
Harada, Yoshinori
Konishi, Eiichi
Otsuji, Eigo
Tanaka, Hideo
Miyake, Jun
Takamatsu, Tetsuro
author_sort Matsumoto, Tatsuya
collection PubMed
description Deep-UV (DUV) excitation fluorescence microscopy has potential to provide rapid diagnosis with simple technique comparing to conventional histopathology based on hematoxylin and eosin (H&E) staining. We established a fluorescent staining protocol for DUV excitation fluorescence imaging that has enabled clear discrimination of nucleoplasm, nucleolus, and cytoplasm. Fluorescence images of metastasis-positive/-negative lymph nodes of gastric cancer patients were used for patch-based training with a deep neural network (DNN) based on Inception-v3 architecture. The performance on small patches of the fluorescence images was comparable with that of H&E images. Gradient-weighted class activation mapping analysis revealed the areas where the trained model identified metastatic lesions in the images containing cancer cells. We extended the method to large-size image analysis enabling accurate detection of metastatic lesions. We discuss usefulness of DUV excitation fluorescence imaging with the aid of DNN analysis, which is promising for assisting pathologists in assessment of lymph node metastasis.
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spelling pubmed-68583522019-11-27 Deep-UV excitation fluorescence microscopy for detection of lymph node metastasis using deep neural network Matsumoto, Tatsuya Niioka, Hirohiko Kumamoto, Yasuaki Sato, Junya Inamori, Osamu Nakao, Ryuta Harada, Yoshinori Konishi, Eiichi Otsuji, Eigo Tanaka, Hideo Miyake, Jun Takamatsu, Tetsuro Sci Rep Article Deep-UV (DUV) excitation fluorescence microscopy has potential to provide rapid diagnosis with simple technique comparing to conventional histopathology based on hematoxylin and eosin (H&E) staining. We established a fluorescent staining protocol for DUV excitation fluorescence imaging that has enabled clear discrimination of nucleoplasm, nucleolus, and cytoplasm. Fluorescence images of metastasis-positive/-negative lymph nodes of gastric cancer patients were used for patch-based training with a deep neural network (DNN) based on Inception-v3 architecture. The performance on small patches of the fluorescence images was comparable with that of H&E images. Gradient-weighted class activation mapping analysis revealed the areas where the trained model identified metastatic lesions in the images containing cancer cells. We extended the method to large-size image analysis enabling accurate detection of metastatic lesions. We discuss usefulness of DUV excitation fluorescence imaging with the aid of DNN analysis, which is promising for assisting pathologists in assessment of lymph node metastasis. Nature Publishing Group UK 2019-11-15 /pmc/articles/PMC6858352/ /pubmed/31729459 http://dx.doi.org/10.1038/s41598-019-53405-w Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Matsumoto, Tatsuya
Niioka, Hirohiko
Kumamoto, Yasuaki
Sato, Junya
Inamori, Osamu
Nakao, Ryuta
Harada, Yoshinori
Konishi, Eiichi
Otsuji, Eigo
Tanaka, Hideo
Miyake, Jun
Takamatsu, Tetsuro
Deep-UV excitation fluorescence microscopy for detection of lymph node metastasis using deep neural network
title Deep-UV excitation fluorescence microscopy for detection of lymph node metastasis using deep neural network
title_full Deep-UV excitation fluorescence microscopy for detection of lymph node metastasis using deep neural network
title_fullStr Deep-UV excitation fluorescence microscopy for detection of lymph node metastasis using deep neural network
title_full_unstemmed Deep-UV excitation fluorescence microscopy for detection of lymph node metastasis using deep neural network
title_short Deep-UV excitation fluorescence microscopy for detection of lymph node metastasis using deep neural network
title_sort deep-uv excitation fluorescence microscopy for detection of lymph node metastasis using deep neural network
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6858352/
https://www.ncbi.nlm.nih.gov/pubmed/31729459
http://dx.doi.org/10.1038/s41598-019-53405-w
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