Cargando…

Virtual screening,docking and molecular dynamics simulation of selected phytochemical compounds bound to receptor tyrosine kinases:A correlative anti angiogenic study

Screening of phytochemicals for their anti angiogenic potential has been a growing area of research in the current decade. The following study proposes virtual screening, drug likeliness and ADME filtering of specific phytochemical based compounds retrieved from "TIP - A Database of Taiwan Indi...

Descripción completa

Detalles Bibliográficos
Autores principales: Saxena, Garima, Akhtar, Salman, Sharma, Neha, Sharma, Mala, Siddiqui, M Haris, Khan, M Kalim A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6859704/
https://www.ncbi.nlm.nih.gov/pubmed/31787809
http://dx.doi.org/10.6026/97320630015613
_version_ 1783471170717220864
author Saxena, Garima
Akhtar, Salman
Sharma, Neha
Sharma, Mala
Siddiqui, M Haris
Khan, M Kalim A
author_facet Saxena, Garima
Akhtar, Salman
Sharma, Neha
Sharma, Mala
Siddiqui, M Haris
Khan, M Kalim A
author_sort Saxena, Garima
collection PubMed
description Screening of phytochemicals for their anti angiogenic potential has been a growing area of research in the current decade. The following study proposes virtual screening, drug likeliness and ADME filtering of specific phytochemical based compounds retrieved from "TIP - A Database of Taiwan Indigenous Plants". The study further subjects the filtered phytochemicals for their molecular docking analysis and molecular dynamics simulation studies against the prominent receptor tyrosine kinases EGFR, VEGFR-1 and VEGFR-2 involved in angiogenesis phenomenon. Among the various in silico analysis done and precise interpretations, the current study finally proposes 1- Hydroxycryprochine as one of the most potent lead in combating angiogenic phenomenon and thus cancer. The following study involves all such important use of in silico platforms, tools and analysis protocols which are expected to reproduce commendable results in wet lab studies. The proposed compound 1-hydroxycryprochine tends to justify its anti angogenic potential in all interactional and stability studies.
format Online
Article
Text
id pubmed-6859704
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Biomedical Informatics
record_format MEDLINE/PubMed
spelling pubmed-68597042019-11-29 Virtual screening,docking and molecular dynamics simulation of selected phytochemical compounds bound to receptor tyrosine kinases:A correlative anti angiogenic study Saxena, Garima Akhtar, Salman Sharma, Neha Sharma, Mala Siddiqui, M Haris Khan, M Kalim A Bioinformation Research Article Screening of phytochemicals for their anti angiogenic potential has been a growing area of research in the current decade. The following study proposes virtual screening, drug likeliness and ADME filtering of specific phytochemical based compounds retrieved from "TIP - A Database of Taiwan Indigenous Plants". The study further subjects the filtered phytochemicals for their molecular docking analysis and molecular dynamics simulation studies against the prominent receptor tyrosine kinases EGFR, VEGFR-1 and VEGFR-2 involved in angiogenesis phenomenon. Among the various in silico analysis done and precise interpretations, the current study finally proposes 1- Hydroxycryprochine as one of the most potent lead in combating angiogenic phenomenon and thus cancer. The following study involves all such important use of in silico platforms, tools and analysis protocols which are expected to reproduce commendable results in wet lab studies. The proposed compound 1-hydroxycryprochine tends to justify its anti angogenic potential in all interactional and stability studies. Biomedical Informatics 2019-09-30 /pmc/articles/PMC6859704/ /pubmed/31787809 http://dx.doi.org/10.6026/97320630015613 Text en © 2019 Biomedical Informatics http://creativecommons.org/licenses/by/3.0/ This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License.
spellingShingle Research Article
Saxena, Garima
Akhtar, Salman
Sharma, Neha
Sharma, Mala
Siddiqui, M Haris
Khan, M Kalim A
Virtual screening,docking and molecular dynamics simulation of selected phytochemical compounds bound to receptor tyrosine kinases:A correlative anti angiogenic study
title Virtual screening,docking and molecular dynamics simulation of selected phytochemical compounds bound to receptor tyrosine kinases:A correlative anti angiogenic study
title_full Virtual screening,docking and molecular dynamics simulation of selected phytochemical compounds bound to receptor tyrosine kinases:A correlative anti angiogenic study
title_fullStr Virtual screening,docking and molecular dynamics simulation of selected phytochemical compounds bound to receptor tyrosine kinases:A correlative anti angiogenic study
title_full_unstemmed Virtual screening,docking and molecular dynamics simulation of selected phytochemical compounds bound to receptor tyrosine kinases:A correlative anti angiogenic study
title_short Virtual screening,docking and molecular dynamics simulation of selected phytochemical compounds bound to receptor tyrosine kinases:A correlative anti angiogenic study
title_sort virtual screening,docking and molecular dynamics simulation of selected phytochemical compounds bound to receptor tyrosine kinases:a correlative anti angiogenic study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6859704/
https://www.ncbi.nlm.nih.gov/pubmed/31787809
http://dx.doi.org/10.6026/97320630015613
work_keys_str_mv AT saxenagarima virtualscreeningdockingandmoleculardynamicssimulationofselectedphytochemicalcompoundsboundtoreceptortyrosinekinasesacorrelativeantiangiogenicstudy
AT akhtarsalman virtualscreeningdockingandmoleculardynamicssimulationofselectedphytochemicalcompoundsboundtoreceptortyrosinekinasesacorrelativeantiangiogenicstudy
AT sharmaneha virtualscreeningdockingandmoleculardynamicssimulationofselectedphytochemicalcompoundsboundtoreceptortyrosinekinasesacorrelativeantiangiogenicstudy
AT sharmamala virtualscreeningdockingandmoleculardynamicssimulationofselectedphytochemicalcompoundsboundtoreceptortyrosinekinasesacorrelativeantiangiogenicstudy
AT siddiquimharis virtualscreeningdockingandmoleculardynamicssimulationofselectedphytochemicalcompoundsboundtoreceptortyrosinekinasesacorrelativeantiangiogenicstudy
AT khanmkalima virtualscreeningdockingandmoleculardynamicssimulationofselectedphytochemicalcompoundsboundtoreceptortyrosinekinasesacorrelativeantiangiogenicstudy