Cargando…
Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System
INTRODUCTION: Many patients who are discharged from the emergency department (ED) with a symptom-based discharge diagnosis (SBD) have post-discharge challenges related to lack of a definitive discharge diagnosis and follow-up plan. There is no well-defined method for identifying patients with a SBD...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Department of Emergency Medicine, University of California, Irvine School of Medicine
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6860381/ https://www.ncbi.nlm.nih.gov/pubmed/31738718 http://dx.doi.org/10.5811/westjem.2019.8.44230 |
_version_ | 1783471225445548032 |
---|---|
author | Slovis, Benjamin H. McCarthy, Danielle M. Nord, Garrison Doty, Amanda MB Piserchia, Katherine Rising, Kristin L. |
author_facet | Slovis, Benjamin H. McCarthy, Danielle M. Nord, Garrison Doty, Amanda MB Piserchia, Katherine Rising, Kristin L. |
author_sort | Slovis, Benjamin H. |
collection | PubMed |
description | INTRODUCTION: Many patients who are discharged from the emergency department (ED) with a symptom-based discharge diagnosis (SBD) have post-discharge challenges related to lack of a definitive discharge diagnosis and follow-up plan. There is no well-defined method for identifying patients with a SBD without individual chart review. We describe a method for automated identification of SBDs from ICD-10 codes using the Unified Medical Language System (UMLS) Metathesaurus. METHODS: We mapped discharge diagnosis, with use of ICD-10 codes from a one-month period of ED discharges at an urban, academic ED to UMLS concepts and semantic types. Two physician reviewers independently manually identified all discharge diagnoses consistent with SBDs. We calculated inter-rater reliability for manual review and the sensitivity and specificity for our automated process for identifying SBDs against this “gold standard.” RESULTS: We identified 3642 ED discharges with 1382 unique discharge diagnoses that corresponded to 875 unique ICD-10 codes and 10 UMLS semantic types. Over one third (37.5%, n = 1367) of ED discharges were assigned codes that mapped to the “Sign or Symptom” semantic type. Inter-rater reliability for manual review of SBDs was very good (0.87). Sensitivity and specificity of our automated process for identifying encounters with SBDs were 84.7% and 96.3%, respectively. CONCLUSION: Use of our automated process to identify ICD-10 codes that classify into the UMLS “Sign or Symptom” semantic type identified the majority of patients with a SBD. While this method needs refinement to increase sensitivity of capture, it has potential to automate an otherwise highly time-consuming process. This novel use of informatics methods can facilitate future research specific to patients with SBDs. |
format | Online Article Text |
id | pubmed-6860381 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Department of Emergency Medicine, University of California, Irvine School of Medicine |
record_format | MEDLINE/PubMed |
spelling | pubmed-68603812019-11-25 Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System Slovis, Benjamin H. McCarthy, Danielle M. Nord, Garrison Doty, Amanda MB Piserchia, Katherine Rising, Kristin L. West J Emerg Med Technology in Emergency Medicine INTRODUCTION: Many patients who are discharged from the emergency department (ED) with a symptom-based discharge diagnosis (SBD) have post-discharge challenges related to lack of a definitive discharge diagnosis and follow-up plan. There is no well-defined method for identifying patients with a SBD without individual chart review. We describe a method for automated identification of SBDs from ICD-10 codes using the Unified Medical Language System (UMLS) Metathesaurus. METHODS: We mapped discharge diagnosis, with use of ICD-10 codes from a one-month period of ED discharges at an urban, academic ED to UMLS concepts and semantic types. Two physician reviewers independently manually identified all discharge diagnoses consistent with SBDs. We calculated inter-rater reliability for manual review and the sensitivity and specificity for our automated process for identifying SBDs against this “gold standard.” RESULTS: We identified 3642 ED discharges with 1382 unique discharge diagnoses that corresponded to 875 unique ICD-10 codes and 10 UMLS semantic types. Over one third (37.5%, n = 1367) of ED discharges were assigned codes that mapped to the “Sign or Symptom” semantic type. Inter-rater reliability for manual review of SBDs was very good (0.87). Sensitivity and specificity of our automated process for identifying encounters with SBDs were 84.7% and 96.3%, respectively. CONCLUSION: Use of our automated process to identify ICD-10 codes that classify into the UMLS “Sign or Symptom” semantic type identified the majority of patients with a SBD. While this method needs refinement to increase sensitivity of capture, it has potential to automate an otherwise highly time-consuming process. This novel use of informatics methods can facilitate future research specific to patients with SBDs. Department of Emergency Medicine, University of California, Irvine School of Medicine 2019-11 2019-10-24 /pmc/articles/PMC6860381/ /pubmed/31738718 http://dx.doi.org/10.5811/westjem.2019.8.44230 Text en Copyright: © 2019 Slovis et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed in accordance with the terms of the Creative Commons Attribution (CC BY 4.0) License. See: http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Technology in Emergency Medicine Slovis, Benjamin H. McCarthy, Danielle M. Nord, Garrison Doty, Amanda MB Piserchia, Katherine Rising, Kristin L. Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System |
title | Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System |
title_full | Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System |
title_fullStr | Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System |
title_full_unstemmed | Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System |
title_short | Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System |
title_sort | identifying emergency department symptom-based diagnoses with the unified medical language system |
topic | Technology in Emergency Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6860381/ https://www.ncbi.nlm.nih.gov/pubmed/31738718 http://dx.doi.org/10.5811/westjem.2019.8.44230 |
work_keys_str_mv | AT slovisbenjaminh identifyingemergencydepartmentsymptombaseddiagnoseswiththeunifiedmedicallanguagesystem AT mccarthydaniellem identifyingemergencydepartmentsymptombaseddiagnoseswiththeunifiedmedicallanguagesystem AT nordgarrison identifyingemergencydepartmentsymptombaseddiagnoseswiththeunifiedmedicallanguagesystem AT dotyamandamb identifyingemergencydepartmentsymptombaseddiagnoseswiththeunifiedmedicallanguagesystem AT piserchiakatherine identifyingemergencydepartmentsymptombaseddiagnoseswiththeunifiedmedicallanguagesystem AT risingkristinl identifyingemergencydepartmentsymptombaseddiagnoseswiththeunifiedmedicallanguagesystem |