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Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System

INTRODUCTION: Many patients who are discharged from the emergency department (ED) with a symptom-based discharge diagnosis (SBD) have post-discharge challenges related to lack of a definitive discharge diagnosis and follow-up plan. There is no well-defined method for identifying patients with a SBD...

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Autores principales: Slovis, Benjamin H., McCarthy, Danielle M., Nord, Garrison, Doty, Amanda MB, Piserchia, Katherine, Rising, Kristin L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Department of Emergency Medicine, University of California, Irvine School of Medicine 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6860381/
https://www.ncbi.nlm.nih.gov/pubmed/31738718
http://dx.doi.org/10.5811/westjem.2019.8.44230
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author Slovis, Benjamin H.
McCarthy, Danielle M.
Nord, Garrison
Doty, Amanda MB
Piserchia, Katherine
Rising, Kristin L.
author_facet Slovis, Benjamin H.
McCarthy, Danielle M.
Nord, Garrison
Doty, Amanda MB
Piserchia, Katherine
Rising, Kristin L.
author_sort Slovis, Benjamin H.
collection PubMed
description INTRODUCTION: Many patients who are discharged from the emergency department (ED) with a symptom-based discharge diagnosis (SBD) have post-discharge challenges related to lack of a definitive discharge diagnosis and follow-up plan. There is no well-defined method for identifying patients with a SBD without individual chart review. We describe a method for automated identification of SBDs from ICD-10 codes using the Unified Medical Language System (UMLS) Metathesaurus. METHODS: We mapped discharge diagnosis, with use of ICD-10 codes from a one-month period of ED discharges at an urban, academic ED to UMLS concepts and semantic types. Two physician reviewers independently manually identified all discharge diagnoses consistent with SBDs. We calculated inter-rater reliability for manual review and the sensitivity and specificity for our automated process for identifying SBDs against this “gold standard.” RESULTS: We identified 3642 ED discharges with 1382 unique discharge diagnoses that corresponded to 875 unique ICD-10 codes and 10 UMLS semantic types. Over one third (37.5%, n = 1367) of ED discharges were assigned codes that mapped to the “Sign or Symptom” semantic type. Inter-rater reliability for manual review of SBDs was very good (0.87). Sensitivity and specificity of our automated process for identifying encounters with SBDs were 84.7% and 96.3%, respectively. CONCLUSION: Use of our automated process to identify ICD-10 codes that classify into the UMLS “Sign or Symptom” semantic type identified the majority of patients with a SBD. While this method needs refinement to increase sensitivity of capture, it has potential to automate an otherwise highly time-consuming process. This novel use of informatics methods can facilitate future research specific to patients with SBDs.
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spelling pubmed-68603812019-11-25 Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System Slovis, Benjamin H. McCarthy, Danielle M. Nord, Garrison Doty, Amanda MB Piserchia, Katherine Rising, Kristin L. West J Emerg Med Technology in Emergency Medicine INTRODUCTION: Many patients who are discharged from the emergency department (ED) with a symptom-based discharge diagnosis (SBD) have post-discharge challenges related to lack of a definitive discharge diagnosis and follow-up plan. There is no well-defined method for identifying patients with a SBD without individual chart review. We describe a method for automated identification of SBDs from ICD-10 codes using the Unified Medical Language System (UMLS) Metathesaurus. METHODS: We mapped discharge diagnosis, with use of ICD-10 codes from a one-month period of ED discharges at an urban, academic ED to UMLS concepts and semantic types. Two physician reviewers independently manually identified all discharge diagnoses consistent with SBDs. We calculated inter-rater reliability for manual review and the sensitivity and specificity for our automated process for identifying SBDs against this “gold standard.” RESULTS: We identified 3642 ED discharges with 1382 unique discharge diagnoses that corresponded to 875 unique ICD-10 codes and 10 UMLS semantic types. Over one third (37.5%, n = 1367) of ED discharges were assigned codes that mapped to the “Sign or Symptom” semantic type. Inter-rater reliability for manual review of SBDs was very good (0.87). Sensitivity and specificity of our automated process for identifying encounters with SBDs were 84.7% and 96.3%, respectively. CONCLUSION: Use of our automated process to identify ICD-10 codes that classify into the UMLS “Sign or Symptom” semantic type identified the majority of patients with a SBD. While this method needs refinement to increase sensitivity of capture, it has potential to automate an otherwise highly time-consuming process. This novel use of informatics methods can facilitate future research specific to patients with SBDs. Department of Emergency Medicine, University of California, Irvine School of Medicine 2019-11 2019-10-24 /pmc/articles/PMC6860381/ /pubmed/31738718 http://dx.doi.org/10.5811/westjem.2019.8.44230 Text en Copyright: © 2019 Slovis et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed in accordance with the terms of the Creative Commons Attribution (CC BY 4.0) License. See: http://creativecommons.org/licenses/by/4.0/
spellingShingle Technology in Emergency Medicine
Slovis, Benjamin H.
McCarthy, Danielle M.
Nord, Garrison
Doty, Amanda MB
Piserchia, Katherine
Rising, Kristin L.
Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System
title Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System
title_full Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System
title_fullStr Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System
title_full_unstemmed Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System
title_short Identifying Emergency Department Symptom-Based Diagnoses with the Unified Medical Language System
title_sort identifying emergency department symptom-based diagnoses with the unified medical language system
topic Technology in Emergency Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6860381/
https://www.ncbi.nlm.nih.gov/pubmed/31738718
http://dx.doi.org/10.5811/westjem.2019.8.44230
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