Cargando…
A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome
Metabolic syndrome is a pathological condition characterized by obesity, hyperglycemia, hypertension, elevated levels of triglycerides and low levels of high-density lipoprotein cholesterol that increase cardiovascular disease risk and type 2 diabetes. Although numerous predisposing genetic risk fac...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6861239/ https://www.ncbi.nlm.nih.gov/pubmed/31740673 http://dx.doi.org/10.1038/s41467-019-13208-z |
_version_ | 1783471309844381696 |
---|---|
author | Misselbeck, Karla Parolo, Silvia Lorenzini, Francesca Savoca, Valeria Leonardelli, Lorena Bora, Pranami Morine, Melissa J. Mione, Maria Caterina Domenici, Enrico Priami, Corrado |
author_facet | Misselbeck, Karla Parolo, Silvia Lorenzini, Francesca Savoca, Valeria Leonardelli, Lorena Bora, Pranami Morine, Melissa J. Mione, Maria Caterina Domenici, Enrico Priami, Corrado |
author_sort | Misselbeck, Karla |
collection | PubMed |
description | Metabolic syndrome is a pathological condition characterized by obesity, hyperglycemia, hypertension, elevated levels of triglycerides and low levels of high-density lipoprotein cholesterol that increase cardiovascular disease risk and type 2 diabetes. Although numerous predisposing genetic risk factors have been identified, the biological mechanisms underlying this complex phenotype are not fully elucidated. Here we introduce a systems biology approach based on network analysis to investigate deregulated biological processes and subsequently identify drug repurposing candidates. A proximity score describing the interaction between drugs and pathways is defined by combining topological and functional similarities. The results of this computational framework highlight a prominent role of the immune system in metabolic syndrome and suggest a potential use of the BTK inhibitor ibrutinib as a novel pharmacological treatment. An experimental validation using a high fat diet-induced obesity model in zebrafish larvae shows the effectiveness of ibrutinib in lowering the inflammatory load due to macrophage accumulation. |
format | Online Article Text |
id | pubmed-6861239 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-68612392019-11-20 A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome Misselbeck, Karla Parolo, Silvia Lorenzini, Francesca Savoca, Valeria Leonardelli, Lorena Bora, Pranami Morine, Melissa J. Mione, Maria Caterina Domenici, Enrico Priami, Corrado Nat Commun Article Metabolic syndrome is a pathological condition characterized by obesity, hyperglycemia, hypertension, elevated levels of triglycerides and low levels of high-density lipoprotein cholesterol that increase cardiovascular disease risk and type 2 diabetes. Although numerous predisposing genetic risk factors have been identified, the biological mechanisms underlying this complex phenotype are not fully elucidated. Here we introduce a systems biology approach based on network analysis to investigate deregulated biological processes and subsequently identify drug repurposing candidates. A proximity score describing the interaction between drugs and pathways is defined by combining topological and functional similarities. The results of this computational framework highlight a prominent role of the immune system in metabolic syndrome and suggest a potential use of the BTK inhibitor ibrutinib as a novel pharmacological treatment. An experimental validation using a high fat diet-induced obesity model in zebrafish larvae shows the effectiveness of ibrutinib in lowering the inflammatory load due to macrophage accumulation. Nature Publishing Group UK 2019-11-18 /pmc/articles/PMC6861239/ /pubmed/31740673 http://dx.doi.org/10.1038/s41467-019-13208-z Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Misselbeck, Karla Parolo, Silvia Lorenzini, Francesca Savoca, Valeria Leonardelli, Lorena Bora, Pranami Morine, Melissa J. Mione, Maria Caterina Domenici, Enrico Priami, Corrado A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome |
title | A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome |
title_full | A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome |
title_fullStr | A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome |
title_full_unstemmed | A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome |
title_short | A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome |
title_sort | network-based approach to identify deregulated pathways and drug effects in metabolic syndrome |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6861239/ https://www.ncbi.nlm.nih.gov/pubmed/31740673 http://dx.doi.org/10.1038/s41467-019-13208-z |
work_keys_str_mv | AT misselbeckkarla anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT parolosilvia anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT lorenzinifrancesca anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT savocavaleria anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT leonardellilorena anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT borapranami anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT morinemelissaj anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT mionemariacaterina anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT domenicienrico anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT priamicorrado anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT misselbeckkarla networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT parolosilvia networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT lorenzinifrancesca networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT savocavaleria networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT leonardellilorena networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT borapranami networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT morinemelissaj networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT mionemariacaterina networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT domenicienrico networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome AT priamicorrado networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome |