Cargando…

A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome

Metabolic syndrome is a pathological condition characterized by obesity, hyperglycemia, hypertension, elevated levels of triglycerides and low levels of high-density lipoprotein cholesterol that increase cardiovascular disease risk and type 2 diabetes. Although numerous predisposing genetic risk fac...

Descripción completa

Detalles Bibliográficos
Autores principales: Misselbeck, Karla, Parolo, Silvia, Lorenzini, Francesca, Savoca, Valeria, Leonardelli, Lorena, Bora, Pranami, Morine, Melissa J., Mione, Maria Caterina, Domenici, Enrico, Priami, Corrado
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6861239/
https://www.ncbi.nlm.nih.gov/pubmed/31740673
http://dx.doi.org/10.1038/s41467-019-13208-z
_version_ 1783471309844381696
author Misselbeck, Karla
Parolo, Silvia
Lorenzini, Francesca
Savoca, Valeria
Leonardelli, Lorena
Bora, Pranami
Morine, Melissa J.
Mione, Maria Caterina
Domenici, Enrico
Priami, Corrado
author_facet Misselbeck, Karla
Parolo, Silvia
Lorenzini, Francesca
Savoca, Valeria
Leonardelli, Lorena
Bora, Pranami
Morine, Melissa J.
Mione, Maria Caterina
Domenici, Enrico
Priami, Corrado
author_sort Misselbeck, Karla
collection PubMed
description Metabolic syndrome is a pathological condition characterized by obesity, hyperglycemia, hypertension, elevated levels of triglycerides and low levels of high-density lipoprotein cholesterol that increase cardiovascular disease risk and type 2 diabetes. Although numerous predisposing genetic risk factors have been identified, the biological mechanisms underlying this complex phenotype are not fully elucidated. Here we introduce a systems biology approach based on network analysis to investigate deregulated biological processes and subsequently identify drug repurposing candidates. A proximity score describing the interaction between drugs and pathways is defined by combining topological and functional similarities. The results of this computational framework highlight a prominent role of the immune system in metabolic syndrome and suggest a potential use of the BTK inhibitor ibrutinib as a novel pharmacological treatment. An experimental validation using a high fat diet-induced obesity model in zebrafish larvae shows the effectiveness of ibrutinib in lowering the inflammatory load due to macrophage accumulation.
format Online
Article
Text
id pubmed-6861239
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-68612392019-11-20 A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome Misselbeck, Karla Parolo, Silvia Lorenzini, Francesca Savoca, Valeria Leonardelli, Lorena Bora, Pranami Morine, Melissa J. Mione, Maria Caterina Domenici, Enrico Priami, Corrado Nat Commun Article Metabolic syndrome is a pathological condition characterized by obesity, hyperglycemia, hypertension, elevated levels of triglycerides and low levels of high-density lipoprotein cholesterol that increase cardiovascular disease risk and type 2 diabetes. Although numerous predisposing genetic risk factors have been identified, the biological mechanisms underlying this complex phenotype are not fully elucidated. Here we introduce a systems biology approach based on network analysis to investigate deregulated biological processes and subsequently identify drug repurposing candidates. A proximity score describing the interaction between drugs and pathways is defined by combining topological and functional similarities. The results of this computational framework highlight a prominent role of the immune system in metabolic syndrome and suggest a potential use of the BTK inhibitor ibrutinib as a novel pharmacological treatment. An experimental validation using a high fat diet-induced obesity model in zebrafish larvae shows the effectiveness of ibrutinib in lowering the inflammatory load due to macrophage accumulation. Nature Publishing Group UK 2019-11-18 /pmc/articles/PMC6861239/ /pubmed/31740673 http://dx.doi.org/10.1038/s41467-019-13208-z Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Misselbeck, Karla
Parolo, Silvia
Lorenzini, Francesca
Savoca, Valeria
Leonardelli, Lorena
Bora, Pranami
Morine, Melissa J.
Mione, Maria Caterina
Domenici, Enrico
Priami, Corrado
A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome
title A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome
title_full A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome
title_fullStr A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome
title_full_unstemmed A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome
title_short A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome
title_sort network-based approach to identify deregulated pathways and drug effects in metabolic syndrome
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6861239/
https://www.ncbi.nlm.nih.gov/pubmed/31740673
http://dx.doi.org/10.1038/s41467-019-13208-z
work_keys_str_mv AT misselbeckkarla anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT parolosilvia anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT lorenzinifrancesca anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT savocavaleria anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT leonardellilorena anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT borapranami anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT morinemelissaj anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT mionemariacaterina anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT domenicienrico anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT priamicorrado anetworkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT misselbeckkarla networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT parolosilvia networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT lorenzinifrancesca networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT savocavaleria networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT leonardellilorena networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT borapranami networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT morinemelissaj networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT mionemariacaterina networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT domenicienrico networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome
AT priamicorrado networkbasedapproachtoidentifyderegulatedpathwaysanddrugeffectsinmetabolicsyndrome