Cargando…
Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry identification of Mycobacterium bovis in Bovinae
In this study, Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDI-TOF) mass spectrometry was used to identify Mycobacterium bovis from cattle and buffalo tissue isolates from the North and South regions of Brazil, grown in solid medium and previously identified by Polymerase Chain Rea...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Japanese Society of Veterinary Science
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6863732/ https://www.ncbi.nlm.nih.gov/pubmed/31462609 http://dx.doi.org/10.1292/jvms.19-0214 |
_version_ | 1783471754660806656 |
---|---|
author | BACANELLI, Gisele OLARTE, Larissa C. SILVA, Márcio R. RODRIGUES, Rudielle A. CARNEIRO, Paulo A.M. KANEENE, John B. PASQUATTI, Taynara N. TAKATANI, Haruo ZUMÁRRAGA, Martin J. ETGES, Rodrigo N. ARAÚJO, Flábio R. VERBISCK, Newton V. |
author_facet | BACANELLI, Gisele OLARTE, Larissa C. SILVA, Márcio R. RODRIGUES, Rudielle A. CARNEIRO, Paulo A.M. KANEENE, John B. PASQUATTI, Taynara N. TAKATANI, Haruo ZUMÁRRAGA, Martin J. ETGES, Rodrigo N. ARAÚJO, Flábio R. VERBISCK, Newton V. |
author_sort | BACANELLI, Gisele |
collection | PubMed |
description | In this study, Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDI-TOF) mass spectrometry was used to identify Mycobacterium bovis from cattle and buffalo tissue isolates from the North and South regions of Brazil, grown in solid medium and previously identified by Polymerase Chain Reaction (PCR) based on Region of Difference 4 (RD4), sequencing and spoligotyping. For this purpose, the protein extraction protocol and the mass spectra reference database were optimized for the identification of 80 clinical isolates of mycobacteria. As a result of this optimization, it was possible to identify and differentiate M. bovis from other members of the Mycobacterium tuberculosis complex with 100% specificity, 90.91% sensitivity and 91.25% reliability. MALDI-TOF MS methodology described herein provides successful identification of M. bovis within bovine/bubaline clinical samples, demonstrating its usefulness for bovine tuberculosis diagnosis in the future. |
format | Online Article Text |
id | pubmed-6863732 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | The Japanese Society of Veterinary Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-68637322019-12-04 Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry identification of Mycobacterium bovis in Bovinae BACANELLI, Gisele OLARTE, Larissa C. SILVA, Márcio R. RODRIGUES, Rudielle A. CARNEIRO, Paulo A.M. KANEENE, John B. PASQUATTI, Taynara N. TAKATANI, Haruo ZUMÁRRAGA, Martin J. ETGES, Rodrigo N. ARAÚJO, Flábio R. VERBISCK, Newton V. J Vet Med Sci Bacteriology In this study, Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDI-TOF) mass spectrometry was used to identify Mycobacterium bovis from cattle and buffalo tissue isolates from the North and South regions of Brazil, grown in solid medium and previously identified by Polymerase Chain Reaction (PCR) based on Region of Difference 4 (RD4), sequencing and spoligotyping. For this purpose, the protein extraction protocol and the mass spectra reference database were optimized for the identification of 80 clinical isolates of mycobacteria. As a result of this optimization, it was possible to identify and differentiate M. bovis from other members of the Mycobacterium tuberculosis complex with 100% specificity, 90.91% sensitivity and 91.25% reliability. MALDI-TOF MS methodology described herein provides successful identification of M. bovis within bovine/bubaline clinical samples, demonstrating its usefulness for bovine tuberculosis diagnosis in the future. The Japanese Society of Veterinary Science 2019-08-28 2019-10 /pmc/articles/PMC6863732/ /pubmed/31462609 http://dx.doi.org/10.1292/jvms.19-0214 Text en ©2019 The Japanese Society of Veterinary Science This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial No Derivatives (by-nc-nd) License. (CC-BY-NC-ND 4.0: https://creativecommons.org/licenses/by-nc-nd/4.0/) |
spellingShingle | Bacteriology BACANELLI, Gisele OLARTE, Larissa C. SILVA, Márcio R. RODRIGUES, Rudielle A. CARNEIRO, Paulo A.M. KANEENE, John B. PASQUATTI, Taynara N. TAKATANI, Haruo ZUMÁRRAGA, Martin J. ETGES, Rodrigo N. ARAÚJO, Flábio R. VERBISCK, Newton V. Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry identification of Mycobacterium bovis in Bovinae |
title | Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry
identification of Mycobacterium bovis in Bovinae |
title_full | Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry
identification of Mycobacterium bovis in Bovinae |
title_fullStr | Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry
identification of Mycobacterium bovis in Bovinae |
title_full_unstemmed | Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry
identification of Mycobacterium bovis in Bovinae |
title_short | Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry
identification of Mycobacterium bovis in Bovinae |
title_sort | matrix assisted laser desorption ionization-time-of-flight mass spectrometry
identification of mycobacterium bovis in bovinae |
topic | Bacteriology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6863732/ https://www.ncbi.nlm.nih.gov/pubmed/31462609 http://dx.doi.org/10.1292/jvms.19-0214 |
work_keys_str_mv | AT bacanelligisele matrixassistedlaserdesorptionionizationtimeofflightmassspectrometryidentificationofmycobacteriumbovisinbovinae AT olartelarissac matrixassistedlaserdesorptionionizationtimeofflightmassspectrometryidentificationofmycobacteriumbovisinbovinae AT silvamarcior matrixassistedlaserdesorptionionizationtimeofflightmassspectrometryidentificationofmycobacteriumbovisinbovinae AT rodriguesrudiellea matrixassistedlaserdesorptionionizationtimeofflightmassspectrometryidentificationofmycobacteriumbovisinbovinae AT carneiropauloam matrixassistedlaserdesorptionionizationtimeofflightmassspectrometryidentificationofmycobacteriumbovisinbovinae AT kaneenejohnb matrixassistedlaserdesorptionionizationtimeofflightmassspectrometryidentificationofmycobacteriumbovisinbovinae AT pasquattitaynaran matrixassistedlaserdesorptionionizationtimeofflightmassspectrometryidentificationofmycobacteriumbovisinbovinae AT takataniharuo matrixassistedlaserdesorptionionizationtimeofflightmassspectrometryidentificationofmycobacteriumbovisinbovinae AT zumarragamartinj matrixassistedlaserdesorptionionizationtimeofflightmassspectrometryidentificationofmycobacteriumbovisinbovinae AT etgesrodrigon matrixassistedlaserdesorptionionizationtimeofflightmassspectrometryidentificationofmycobacteriumbovisinbovinae AT araujoflabior matrixassistedlaserdesorptionionizationtimeofflightmassspectrometryidentificationofmycobacteriumbovisinbovinae AT verbiscknewtonv matrixassistedlaserdesorptionionizationtimeofflightmassspectrometryidentificationofmycobacteriumbovisinbovinae |