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Optimizing Retrieval of Biospecimens Using the Curated Cancer Clinical Outcomes Database (C3OD)
To fully support their role in translational and personalized medicine, biorepositories and biobanks must continue to advance the annotation of their biospecimens with robust clinical and laboratory data. Translational research and personalized medicine require well-documented and up-to-date informa...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6864036/ https://www.ncbi.nlm.nih.gov/pubmed/31798300 http://dx.doi.org/10.1177/1176935119886831 |
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author | Mudaranthakam, Dinesh Pal Shergina, Elena Park, Michele Thompson, Jeffrey Streeter, David Hu, Jinxiang Wick, Jo Gajewski, Byron Koestler, Devin C Godwin, Andrew K Jensen, Roy A Mayo, Matthew S |
author_facet | Mudaranthakam, Dinesh Pal Shergina, Elena Park, Michele Thompson, Jeffrey Streeter, David Hu, Jinxiang Wick, Jo Gajewski, Byron Koestler, Devin C Godwin, Andrew K Jensen, Roy A Mayo, Matthew S |
author_sort | Mudaranthakam, Dinesh Pal |
collection | PubMed |
description | To fully support their role in translational and personalized medicine, biorepositories and biobanks must continue to advance the annotation of their biospecimens with robust clinical and laboratory data. Translational research and personalized medicine require well-documented and up-to-date information, but the infrastructure used to support biorepositories and biobanks can easily be out of sync with the host institution. To assist researchers and provide them with accurate pathological, epidemiological, and bio-molecular data, the Biospecimen Repository Core Facility (BRCF) at the University of Kansas Medical Center (KUMC) merges data from medical records, the tumor registry, and pathology reports using the Curated Cancer Clinical Outcomes Database (C3OD). In this report, we describe the utilization of C3OD to optimally retrieve and dispense biospecimen samples using these 3 data sources and demonstrate how C3OD greatly increases the efficiency of obtaining biospecimen samples for the researchers. |
format | Online Article Text |
id | pubmed-6864036 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-68640362019-12-03 Optimizing Retrieval of Biospecimens Using the Curated Cancer Clinical Outcomes Database (C3OD) Mudaranthakam, Dinesh Pal Shergina, Elena Park, Michele Thompson, Jeffrey Streeter, David Hu, Jinxiang Wick, Jo Gajewski, Byron Koestler, Devin C Godwin, Andrew K Jensen, Roy A Mayo, Matthew S Cancer Inform Short Report To fully support their role in translational and personalized medicine, biorepositories and biobanks must continue to advance the annotation of their biospecimens with robust clinical and laboratory data. Translational research and personalized medicine require well-documented and up-to-date information, but the infrastructure used to support biorepositories and biobanks can easily be out of sync with the host institution. To assist researchers and provide them with accurate pathological, epidemiological, and bio-molecular data, the Biospecimen Repository Core Facility (BRCF) at the University of Kansas Medical Center (KUMC) merges data from medical records, the tumor registry, and pathology reports using the Curated Cancer Clinical Outcomes Database (C3OD). In this report, we describe the utilization of C3OD to optimally retrieve and dispense biospecimen samples using these 3 data sources and demonstrate how C3OD greatly increases the efficiency of obtaining biospecimen samples for the researchers. SAGE Publications 2019-11-18 /pmc/articles/PMC6864036/ /pubmed/31798300 http://dx.doi.org/10.1177/1176935119886831 Text en © The Author(s) 2019 http://creativecommons.org/licenses/by/4.0/ This article is distributed under the terms of the Creative Commons Attribution 4.0 License (http://www.creativecommons.org/licenses/by/4.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Short Report Mudaranthakam, Dinesh Pal Shergina, Elena Park, Michele Thompson, Jeffrey Streeter, David Hu, Jinxiang Wick, Jo Gajewski, Byron Koestler, Devin C Godwin, Andrew K Jensen, Roy A Mayo, Matthew S Optimizing Retrieval of Biospecimens Using the Curated Cancer Clinical Outcomes Database (C3OD) |
title | Optimizing Retrieval of Biospecimens Using the Curated Cancer
Clinical Outcomes Database (C3OD) |
title_full | Optimizing Retrieval of Biospecimens Using the Curated Cancer
Clinical Outcomes Database (C3OD) |
title_fullStr | Optimizing Retrieval of Biospecimens Using the Curated Cancer
Clinical Outcomes Database (C3OD) |
title_full_unstemmed | Optimizing Retrieval of Biospecimens Using the Curated Cancer
Clinical Outcomes Database (C3OD) |
title_short | Optimizing Retrieval of Biospecimens Using the Curated Cancer
Clinical Outcomes Database (C3OD) |
title_sort | optimizing retrieval of biospecimens using the curated cancer
clinical outcomes database (c3od) |
topic | Short Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6864036/ https://www.ncbi.nlm.nih.gov/pubmed/31798300 http://dx.doi.org/10.1177/1176935119886831 |
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