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Can visual interpretation of NucliSens graphs reduce the need for repeat viral load testing?
BACKGROUND: In Zimbabwe, viral load (VL) testing for people living with HIV on antiretroviral therapy is performed at the National Microbiology Reference Laboratory using a NucliSens machine. Anecdotal evidence has shown that invalid graphs for “Target Not Detectable (TND)” will upon repeat VL testi...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6867593/ https://www.ncbi.nlm.nih.gov/pubmed/31747448 http://dx.doi.org/10.1371/journal.pone.0223597 |
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author | Handireketi, Newten Timire, Collins Shewade, Hemant Deepak Munemo, Ellen Nyagupe, Charles Chipuka, Sandra Sisya, Lucia Gumbo, Hlanai Dhitima, Ezekiel Harries, Anthony D. |
author_facet | Handireketi, Newten Timire, Collins Shewade, Hemant Deepak Munemo, Ellen Nyagupe, Charles Chipuka, Sandra Sisya, Lucia Gumbo, Hlanai Dhitima, Ezekiel Harries, Anthony D. |
author_sort | Handireketi, Newten |
collection | PubMed |
description | BACKGROUND: In Zimbabwe, viral load (VL) testing for people living with HIV on antiretroviral therapy is performed at the National Microbiology Reference Laboratory using a NucliSens machine. Anecdotal evidence has shown that invalid graphs for “Target Not Detectable (TND)” will upon repeat VL testing produce a valid result for virus not detected, therefore removing the need to repeat the test. This needs formal assessment. OBJECTIVES: To determine i) intra- and inter-rater agreement of the visual interpretation of NucliSens graphs (Target Detectable [TD], TND and No Line [NL]) between two laboratory scientists and ii) sensitivity, specificity and predictive values of the NucliSens graphs compared with repeat VL results. METHOD: Cross sectional study using secondary data. Two laboratory scientists independently rated graphs one week apart for intra-rater agreement and compared final ratings with each other for inter-rater agreement. Consensus interpretations of graphs were compared with repeat VL results. Kappa coefficients were used to obtain measures of agreement. RESULTS: There were 562 patients with NucliSens graphs and repeat VL. Kappa scores were: 0.98 (Scientist A); 0.99 (Scientist B); 0.96 (Scientist A versus Scientist B); and 0.65 (NucliSens graphs versus VL). Sensitivity, specificity, positive predictive value and negative predictive value for graphs compared with VL were 71%, 92%, 79% and 89% respectively. CONCLUSION: Intra-and inter-rater agreements were almost perfect. The negative predictive value translates to a false negative rate of 11%. If repeat VL testing is not done, the clinical consequences need to be balanced against cost savings and the risks outweigh the benefits. |
format | Online Article Text |
id | pubmed-6867593 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-68675932019-12-07 Can visual interpretation of NucliSens graphs reduce the need for repeat viral load testing? Handireketi, Newten Timire, Collins Shewade, Hemant Deepak Munemo, Ellen Nyagupe, Charles Chipuka, Sandra Sisya, Lucia Gumbo, Hlanai Dhitima, Ezekiel Harries, Anthony D. PLoS One Research Article BACKGROUND: In Zimbabwe, viral load (VL) testing for people living with HIV on antiretroviral therapy is performed at the National Microbiology Reference Laboratory using a NucliSens machine. Anecdotal evidence has shown that invalid graphs for “Target Not Detectable (TND)” will upon repeat VL testing produce a valid result for virus not detected, therefore removing the need to repeat the test. This needs formal assessment. OBJECTIVES: To determine i) intra- and inter-rater agreement of the visual interpretation of NucliSens graphs (Target Detectable [TD], TND and No Line [NL]) between two laboratory scientists and ii) sensitivity, specificity and predictive values of the NucliSens graphs compared with repeat VL results. METHOD: Cross sectional study using secondary data. Two laboratory scientists independently rated graphs one week apart for intra-rater agreement and compared final ratings with each other for inter-rater agreement. Consensus interpretations of graphs were compared with repeat VL results. Kappa coefficients were used to obtain measures of agreement. RESULTS: There were 562 patients with NucliSens graphs and repeat VL. Kappa scores were: 0.98 (Scientist A); 0.99 (Scientist B); 0.96 (Scientist A versus Scientist B); and 0.65 (NucliSens graphs versus VL). Sensitivity, specificity, positive predictive value and negative predictive value for graphs compared with VL were 71%, 92%, 79% and 89% respectively. CONCLUSION: Intra-and inter-rater agreements were almost perfect. The negative predictive value translates to a false negative rate of 11%. If repeat VL testing is not done, the clinical consequences need to be balanced against cost savings and the risks outweigh the benefits. Public Library of Science 2019-11-20 /pmc/articles/PMC6867593/ /pubmed/31747448 http://dx.doi.org/10.1371/journal.pone.0223597 Text en © 2019 Handireketi et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Handireketi, Newten Timire, Collins Shewade, Hemant Deepak Munemo, Ellen Nyagupe, Charles Chipuka, Sandra Sisya, Lucia Gumbo, Hlanai Dhitima, Ezekiel Harries, Anthony D. Can visual interpretation of NucliSens graphs reduce the need for repeat viral load testing? |
title | Can visual interpretation of NucliSens graphs reduce the need for repeat viral load testing? |
title_full | Can visual interpretation of NucliSens graphs reduce the need for repeat viral load testing? |
title_fullStr | Can visual interpretation of NucliSens graphs reduce the need for repeat viral load testing? |
title_full_unstemmed | Can visual interpretation of NucliSens graphs reduce the need for repeat viral load testing? |
title_short | Can visual interpretation of NucliSens graphs reduce the need for repeat viral load testing? |
title_sort | can visual interpretation of nuclisens graphs reduce the need for repeat viral load testing? |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6867593/ https://www.ncbi.nlm.nih.gov/pubmed/31747448 http://dx.doi.org/10.1371/journal.pone.0223597 |
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