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Mass Cytometry Imaging for the Study of Human Diseases—Applications and Data Analysis Strategies

High parameter imaging is an important tool in the life sciences for both discovery and healthcare applications. Imaging Mass Cytometry (IMC) and Multiplexed Ion Beam Imaging (MIBI) are two relatively recent technologies which enable clinical samples to be simultaneously analyzed for up to 40 parame...

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Detalles Bibliográficos
Autores principales: Baharlou, Heeva, Canete, Nicolas P., Cunningham, Anthony L., Harman, Andrew N., Patrick, Ellis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6868098/
https://www.ncbi.nlm.nih.gov/pubmed/31798587
http://dx.doi.org/10.3389/fimmu.2019.02657
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author Baharlou, Heeva
Canete, Nicolas P.
Cunningham, Anthony L.
Harman, Andrew N.
Patrick, Ellis
author_facet Baharlou, Heeva
Canete, Nicolas P.
Cunningham, Anthony L.
Harman, Andrew N.
Patrick, Ellis
author_sort Baharlou, Heeva
collection PubMed
description High parameter imaging is an important tool in the life sciences for both discovery and healthcare applications. Imaging Mass Cytometry (IMC) and Multiplexed Ion Beam Imaging (MIBI) are two relatively recent technologies which enable clinical samples to be simultaneously analyzed for up to 40 parameters at subcellular resolution. Importantly, these “Mass Cytometry Imaging” (MCI) modalities are being rapidly adopted for studies of the immune system in both health and disease. In this review we discuss, first, the various applications of MCI to date. Second, due to the inherent challenge of analyzing high parameter spatial data, we discuss the various approaches that have been employed for the processing and analysis of data from MCI experiments.
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spelling pubmed-68680982019-12-03 Mass Cytometry Imaging for the Study of Human Diseases—Applications and Data Analysis Strategies Baharlou, Heeva Canete, Nicolas P. Cunningham, Anthony L. Harman, Andrew N. Patrick, Ellis Front Immunol Immunology High parameter imaging is an important tool in the life sciences for both discovery and healthcare applications. Imaging Mass Cytometry (IMC) and Multiplexed Ion Beam Imaging (MIBI) are two relatively recent technologies which enable clinical samples to be simultaneously analyzed for up to 40 parameters at subcellular resolution. Importantly, these “Mass Cytometry Imaging” (MCI) modalities are being rapidly adopted for studies of the immune system in both health and disease. In this review we discuss, first, the various applications of MCI to date. Second, due to the inherent challenge of analyzing high parameter spatial data, we discuss the various approaches that have been employed for the processing and analysis of data from MCI experiments. Frontiers Media S.A. 2019-11-14 /pmc/articles/PMC6868098/ /pubmed/31798587 http://dx.doi.org/10.3389/fimmu.2019.02657 Text en Copyright © 2019 Baharlou, Canete, Cunningham, Harman and Patrick. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Baharlou, Heeva
Canete, Nicolas P.
Cunningham, Anthony L.
Harman, Andrew N.
Patrick, Ellis
Mass Cytometry Imaging for the Study of Human Diseases—Applications and Data Analysis Strategies
title Mass Cytometry Imaging for the Study of Human Diseases—Applications and Data Analysis Strategies
title_full Mass Cytometry Imaging for the Study of Human Diseases—Applications and Data Analysis Strategies
title_fullStr Mass Cytometry Imaging for the Study of Human Diseases—Applications and Data Analysis Strategies
title_full_unstemmed Mass Cytometry Imaging for the Study of Human Diseases—Applications and Data Analysis Strategies
title_short Mass Cytometry Imaging for the Study of Human Diseases—Applications and Data Analysis Strategies
title_sort mass cytometry imaging for the study of human diseases—applications and data analysis strategies
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6868098/
https://www.ncbi.nlm.nih.gov/pubmed/31798587
http://dx.doi.org/10.3389/fimmu.2019.02657
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