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M3VR—A multi-stage, multi-resolution, and multi-volumes-of-interest volume registration method applied to 3D endovaginal ultrasound

Heterogeneity of echo-texture and lack of sharply delineated tissue boundaries in diagnostic ultrasound images make three-dimensional (3D) registration challenging, especially when the volumes to be registered are considerably different due to local changes. We implemented a novel computational meth...

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Detalles Bibliográficos
Autores principales: Xing, Qi, Chitnis, Parag, Sikdar, Siddhartha, Alshiek, Jonia, Shobeiri, S. Abbas, Wei, Qi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6872108/
https://www.ncbi.nlm.nih.gov/pubmed/31751356
http://dx.doi.org/10.1371/journal.pone.0224583
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author Xing, Qi
Chitnis, Parag
Sikdar, Siddhartha
Alshiek, Jonia
Shobeiri, S. Abbas
Wei, Qi
author_facet Xing, Qi
Chitnis, Parag
Sikdar, Siddhartha
Alshiek, Jonia
Shobeiri, S. Abbas
Wei, Qi
author_sort Xing, Qi
collection PubMed
description Heterogeneity of echo-texture and lack of sharply delineated tissue boundaries in diagnostic ultrasound images make three-dimensional (3D) registration challenging, especially when the volumes to be registered are considerably different due to local changes. We implemented a novel computational method that optimally registers volumetric ultrasound image data containing significant and local anatomical differences. It is A Multi-stage, Multi-resolution, and Multi-volumes-of-interest Volume Registration Method. A single region registration is optimized first for a close initial alignment to avoid convergence to a locally optimal solution. Multiple sub-volumes of interest can then be selected as target alignment regions to achieve confident consistency across the volume. Finally, a multi-resolution rigid registration is performed on these sub-volumes associated with different weights in the cost function. We applied the method on 3D endovaginal ultrasound image data acquired from patients during biopsy procedure of the pelvic floor muscle. Systematic assessment of our proposed method through cross validation demonstrated its accuracy and robustness. The algorithm can also be applied on medical imaging data of other modalities for which the traditional rigid registration methods would fail.
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spelling pubmed-68721082019-12-07 M3VR—A multi-stage, multi-resolution, and multi-volumes-of-interest volume registration method applied to 3D endovaginal ultrasound Xing, Qi Chitnis, Parag Sikdar, Siddhartha Alshiek, Jonia Shobeiri, S. Abbas Wei, Qi PLoS One Research Article Heterogeneity of echo-texture and lack of sharply delineated tissue boundaries in diagnostic ultrasound images make three-dimensional (3D) registration challenging, especially when the volumes to be registered are considerably different due to local changes. We implemented a novel computational method that optimally registers volumetric ultrasound image data containing significant and local anatomical differences. It is A Multi-stage, Multi-resolution, and Multi-volumes-of-interest Volume Registration Method. A single region registration is optimized first for a close initial alignment to avoid convergence to a locally optimal solution. Multiple sub-volumes of interest can then be selected as target alignment regions to achieve confident consistency across the volume. Finally, a multi-resolution rigid registration is performed on these sub-volumes associated with different weights in the cost function. We applied the method on 3D endovaginal ultrasound image data acquired from patients during biopsy procedure of the pelvic floor muscle. Systematic assessment of our proposed method through cross validation demonstrated its accuracy and robustness. The algorithm can also be applied on medical imaging data of other modalities for which the traditional rigid registration methods would fail. Public Library of Science 2019-11-21 /pmc/articles/PMC6872108/ /pubmed/31751356 http://dx.doi.org/10.1371/journal.pone.0224583 Text en © 2019 Xing et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Xing, Qi
Chitnis, Parag
Sikdar, Siddhartha
Alshiek, Jonia
Shobeiri, S. Abbas
Wei, Qi
M3VR—A multi-stage, multi-resolution, and multi-volumes-of-interest volume registration method applied to 3D endovaginal ultrasound
title M3VR—A multi-stage, multi-resolution, and multi-volumes-of-interest volume registration method applied to 3D endovaginal ultrasound
title_full M3VR—A multi-stage, multi-resolution, and multi-volumes-of-interest volume registration method applied to 3D endovaginal ultrasound
title_fullStr M3VR—A multi-stage, multi-resolution, and multi-volumes-of-interest volume registration method applied to 3D endovaginal ultrasound
title_full_unstemmed M3VR—A multi-stage, multi-resolution, and multi-volumes-of-interest volume registration method applied to 3D endovaginal ultrasound
title_short M3VR—A multi-stage, multi-resolution, and multi-volumes-of-interest volume registration method applied to 3D endovaginal ultrasound
title_sort m3vr—a multi-stage, multi-resolution, and multi-volumes-of-interest volume registration method applied to 3d endovaginal ultrasound
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6872108/
https://www.ncbi.nlm.nih.gov/pubmed/31751356
http://dx.doi.org/10.1371/journal.pone.0224583
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