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Pancreatic Islet Transcriptional Enhancers and Diabetes

PURPOSE OF REVIEW: Common genetic variants that associate with type 2 diabetes risk are markedly enriched in pancreatic islet transcriptional enhancers. This review discusses current advances in the annotation of islet enhancer variants and their target genes. RECENT FINDINGS: Recent methodological...

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Detalles Bibliográficos
Autor principal: Cebola, Inês
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6872509/
https://www.ncbi.nlm.nih.gov/pubmed/31754873
http://dx.doi.org/10.1007/s11892-019-1230-6
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author Cebola, Inês
author_facet Cebola, Inês
author_sort Cebola, Inês
collection PubMed
description PURPOSE OF REVIEW: Common genetic variants that associate with type 2 diabetes risk are markedly enriched in pancreatic islet transcriptional enhancers. This review discusses current advances in the annotation of islet enhancer variants and their target genes. RECENT FINDINGS: Recent methodological advances now allow genetic and functional mapping of diabetes causal variants at unprecedented resolution. Mapping of enhancer-promoter interactions in human islets has provided a unique appreciation of the complexity of islet gene regulatory processes and enabled direct association of noncoding diabetes risk variants to their target genes. SUMMARY: The recently improved human islet enhancer annotations constitute a framework for the interpretation of diabetes genetic signals in the context of pancreatic islet gene regulation. In the future, integration of existing and yet to come regulatory maps with genetic fine-mapping efforts and in-depth functional characterization will foster the discovery of novel diabetes molecular risk mechanisms.
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spelling pubmed-68725092019-12-05 Pancreatic Islet Transcriptional Enhancers and Diabetes Cebola, Inês Curr Diab Rep Genetics (AP Morris, Section Editor) PURPOSE OF REVIEW: Common genetic variants that associate with type 2 diabetes risk are markedly enriched in pancreatic islet transcriptional enhancers. This review discusses current advances in the annotation of islet enhancer variants and their target genes. RECENT FINDINGS: Recent methodological advances now allow genetic and functional mapping of diabetes causal variants at unprecedented resolution. Mapping of enhancer-promoter interactions in human islets has provided a unique appreciation of the complexity of islet gene regulatory processes and enabled direct association of noncoding diabetes risk variants to their target genes. SUMMARY: The recently improved human islet enhancer annotations constitute a framework for the interpretation of diabetes genetic signals in the context of pancreatic islet gene regulation. In the future, integration of existing and yet to come regulatory maps with genetic fine-mapping efforts and in-depth functional characterization will foster the discovery of novel diabetes molecular risk mechanisms. Springer US 2019-11-21 2019 /pmc/articles/PMC6872509/ /pubmed/31754873 http://dx.doi.org/10.1007/s11892-019-1230-6 Text en © The Author(s) 2019 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Genetics (AP Morris, Section Editor)
Cebola, Inês
Pancreatic Islet Transcriptional Enhancers and Diabetes
title Pancreatic Islet Transcriptional Enhancers and Diabetes
title_full Pancreatic Islet Transcriptional Enhancers and Diabetes
title_fullStr Pancreatic Islet Transcriptional Enhancers and Diabetes
title_full_unstemmed Pancreatic Islet Transcriptional Enhancers and Diabetes
title_short Pancreatic Islet Transcriptional Enhancers and Diabetes
title_sort pancreatic islet transcriptional enhancers and diabetes
topic Genetics (AP Morris, Section Editor)
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6872509/
https://www.ncbi.nlm.nih.gov/pubmed/31754873
http://dx.doi.org/10.1007/s11892-019-1230-6
work_keys_str_mv AT cebolaines pancreaticislettranscriptionalenhancersanddiabetes