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Pancreatic Islet Transcriptional Enhancers and Diabetes
PURPOSE OF REVIEW: Common genetic variants that associate with type 2 diabetes risk are markedly enriched in pancreatic islet transcriptional enhancers. This review discusses current advances in the annotation of islet enhancer variants and their target genes. RECENT FINDINGS: Recent methodological...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer US
2019
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6872509/ https://www.ncbi.nlm.nih.gov/pubmed/31754873 http://dx.doi.org/10.1007/s11892-019-1230-6 |
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author | Cebola, Inês |
author_facet | Cebola, Inês |
author_sort | Cebola, Inês |
collection | PubMed |
description | PURPOSE OF REVIEW: Common genetic variants that associate with type 2 diabetes risk are markedly enriched in pancreatic islet transcriptional enhancers. This review discusses current advances in the annotation of islet enhancer variants and their target genes. RECENT FINDINGS: Recent methodological advances now allow genetic and functional mapping of diabetes causal variants at unprecedented resolution. Mapping of enhancer-promoter interactions in human islets has provided a unique appreciation of the complexity of islet gene regulatory processes and enabled direct association of noncoding diabetes risk variants to their target genes. SUMMARY: The recently improved human islet enhancer annotations constitute a framework for the interpretation of diabetes genetic signals in the context of pancreatic islet gene regulation. In the future, integration of existing and yet to come regulatory maps with genetic fine-mapping efforts and in-depth functional characterization will foster the discovery of novel diabetes molecular risk mechanisms. |
format | Online Article Text |
id | pubmed-6872509 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-68725092019-12-05 Pancreatic Islet Transcriptional Enhancers and Diabetes Cebola, Inês Curr Diab Rep Genetics (AP Morris, Section Editor) PURPOSE OF REVIEW: Common genetic variants that associate with type 2 diabetes risk are markedly enriched in pancreatic islet transcriptional enhancers. This review discusses current advances in the annotation of islet enhancer variants and their target genes. RECENT FINDINGS: Recent methodological advances now allow genetic and functional mapping of diabetes causal variants at unprecedented resolution. Mapping of enhancer-promoter interactions in human islets has provided a unique appreciation of the complexity of islet gene regulatory processes and enabled direct association of noncoding diabetes risk variants to their target genes. SUMMARY: The recently improved human islet enhancer annotations constitute a framework for the interpretation of diabetes genetic signals in the context of pancreatic islet gene regulation. In the future, integration of existing and yet to come regulatory maps with genetic fine-mapping efforts and in-depth functional characterization will foster the discovery of novel diabetes molecular risk mechanisms. Springer US 2019-11-21 2019 /pmc/articles/PMC6872509/ /pubmed/31754873 http://dx.doi.org/10.1007/s11892-019-1230-6 Text en © The Author(s) 2019 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Genetics (AP Morris, Section Editor) Cebola, Inês Pancreatic Islet Transcriptional Enhancers and Diabetes |
title | Pancreatic Islet Transcriptional Enhancers and Diabetes |
title_full | Pancreatic Islet Transcriptional Enhancers and Diabetes |
title_fullStr | Pancreatic Islet Transcriptional Enhancers and Diabetes |
title_full_unstemmed | Pancreatic Islet Transcriptional Enhancers and Diabetes |
title_short | Pancreatic Islet Transcriptional Enhancers and Diabetes |
title_sort | pancreatic islet transcriptional enhancers and diabetes |
topic | Genetics (AP Morris, Section Editor) |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6872509/ https://www.ncbi.nlm.nih.gov/pubmed/31754873 http://dx.doi.org/10.1007/s11892-019-1230-6 |
work_keys_str_mv | AT cebolaines pancreaticislettranscriptionalenhancersanddiabetes |