Cargando…
Association of IKZF1 SNPs in cold medicine-related Stevens–Johnson syndrome in Thailand
PURPOSE: Our meta-analysis of several ethnic groups (Japanese, Korean, Indian, Brazilian) revealed a significant genome-wide association between cold medicine-related SJS/TEN (CM-SJS/TEN) with severe ocular complications (SOC) and IKZF1 SNPs, suggesting that IKZF1 might be a potential marker for sus...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6873726/ https://www.ncbi.nlm.nih.gov/pubmed/31768251 http://dx.doi.org/10.1186/s13601-019-0300-9 |
_version_ | 1783472723098337280 |
---|---|
author | Chantaren, Patchima Jongkhajornpong, Passara Ueta, Mayumi Puangsricharern, Vilavun Lekhanont, Kaevalin Pisuchpen, Phattrawan Prabhasawat, Pinnita Suphapeetiporn, Kanya Kinoshita, Shigeru |
author_facet | Chantaren, Patchima Jongkhajornpong, Passara Ueta, Mayumi Puangsricharern, Vilavun Lekhanont, Kaevalin Pisuchpen, Phattrawan Prabhasawat, Pinnita Suphapeetiporn, Kanya Kinoshita, Shigeru |
author_sort | Chantaren, Patchima |
collection | PubMed |
description | PURPOSE: Our meta-analysis of several ethnic groups (Japanese, Korean, Indian, Brazilian) revealed a significant genome-wide association between cold medicine-related SJS/TEN (CM-SJS/TEN) with severe ocular complications (SOC) and IKZF1 SNPs, suggesting that IKZF1 might be a potential marker for susceptibility to CM-SJS/TEN with SOC. In this study, we examined the association between CM-SJS/TEN with SOC and the IKZF1 SNPs in the Thai population. METHODS: 57 CM-SJS/TEN with SOC and 171 control samples were collected at Chulalongkorn University and Mahidol University. Genomic DNA samples were genotyped for the IKZF1 SNPs at Kyoto Prefectural University of Medicine in Japan using the TaqMan SNP genotyping assay. RESULTS: The four SNPs previously reported to be associated with CM-SJS/TEN with SOC in the Japanese were examined in the Thai samples. Although the number of Thai cases (n = 57) was small, a significant association between CM-SJS/TEN with SOC and IKZF1 SNPs which included rs4917014 (T vs G, OR = 2.9, p = 0.0012, Pc = 0.0049), rs4917129 (T vs C, OR = 2.8, p = 0.0026, Pc = 0.010) and rs10276619 (G vs A, OR = 1.8, p = 0.012, Pc = 0.048) was identified. CONCLUSION: In addition to the Japanese, Korean and Indian populations, Thai cases with CM-SJS/TEN and SOC were significantly associated with IKZF1 SNPs. With our previous report of the critical role of IKZF1 in mucocutaneous inflammation, these results suggest that IKZF1 is important in the pathogenesis of CM-SJS/TEN with SOC. |
format | Online Article Text |
id | pubmed-6873726 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-68737262019-11-25 Association of IKZF1 SNPs in cold medicine-related Stevens–Johnson syndrome in Thailand Chantaren, Patchima Jongkhajornpong, Passara Ueta, Mayumi Puangsricharern, Vilavun Lekhanont, Kaevalin Pisuchpen, Phattrawan Prabhasawat, Pinnita Suphapeetiporn, Kanya Kinoshita, Shigeru Clin Transl Allergy Research Letter PURPOSE: Our meta-analysis of several ethnic groups (Japanese, Korean, Indian, Brazilian) revealed a significant genome-wide association between cold medicine-related SJS/TEN (CM-SJS/TEN) with severe ocular complications (SOC) and IKZF1 SNPs, suggesting that IKZF1 might be a potential marker for susceptibility to CM-SJS/TEN with SOC. In this study, we examined the association between CM-SJS/TEN with SOC and the IKZF1 SNPs in the Thai population. METHODS: 57 CM-SJS/TEN with SOC and 171 control samples were collected at Chulalongkorn University and Mahidol University. Genomic DNA samples were genotyped for the IKZF1 SNPs at Kyoto Prefectural University of Medicine in Japan using the TaqMan SNP genotyping assay. RESULTS: The four SNPs previously reported to be associated with CM-SJS/TEN with SOC in the Japanese were examined in the Thai samples. Although the number of Thai cases (n = 57) was small, a significant association between CM-SJS/TEN with SOC and IKZF1 SNPs which included rs4917014 (T vs G, OR = 2.9, p = 0.0012, Pc = 0.0049), rs4917129 (T vs C, OR = 2.8, p = 0.0026, Pc = 0.010) and rs10276619 (G vs A, OR = 1.8, p = 0.012, Pc = 0.048) was identified. CONCLUSION: In addition to the Japanese, Korean and Indian populations, Thai cases with CM-SJS/TEN and SOC were significantly associated with IKZF1 SNPs. With our previous report of the critical role of IKZF1 in mucocutaneous inflammation, these results suggest that IKZF1 is important in the pathogenesis of CM-SJS/TEN with SOC. BioMed Central 2019-11-22 /pmc/articles/PMC6873726/ /pubmed/31768251 http://dx.doi.org/10.1186/s13601-019-0300-9 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Letter Chantaren, Patchima Jongkhajornpong, Passara Ueta, Mayumi Puangsricharern, Vilavun Lekhanont, Kaevalin Pisuchpen, Phattrawan Prabhasawat, Pinnita Suphapeetiporn, Kanya Kinoshita, Shigeru Association of IKZF1 SNPs in cold medicine-related Stevens–Johnson syndrome in Thailand |
title | Association of IKZF1 SNPs in cold medicine-related Stevens–Johnson syndrome in Thailand |
title_full | Association of IKZF1 SNPs in cold medicine-related Stevens–Johnson syndrome in Thailand |
title_fullStr | Association of IKZF1 SNPs in cold medicine-related Stevens–Johnson syndrome in Thailand |
title_full_unstemmed | Association of IKZF1 SNPs in cold medicine-related Stevens–Johnson syndrome in Thailand |
title_short | Association of IKZF1 SNPs in cold medicine-related Stevens–Johnson syndrome in Thailand |
title_sort | association of ikzf1 snps in cold medicine-related stevens–johnson syndrome in thailand |
topic | Research Letter |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6873726/ https://www.ncbi.nlm.nih.gov/pubmed/31768251 http://dx.doi.org/10.1186/s13601-019-0300-9 |
work_keys_str_mv | AT chantarenpatchima associationofikzf1snpsincoldmedicinerelatedstevensjohnsonsyndromeinthailand AT jongkhajornpongpassara associationofikzf1snpsincoldmedicinerelatedstevensjohnsonsyndromeinthailand AT uetamayumi associationofikzf1snpsincoldmedicinerelatedstevensjohnsonsyndromeinthailand AT puangsricharernvilavun associationofikzf1snpsincoldmedicinerelatedstevensjohnsonsyndromeinthailand AT lekhanontkaevalin associationofikzf1snpsincoldmedicinerelatedstevensjohnsonsyndromeinthailand AT pisuchpenphattrawan associationofikzf1snpsincoldmedicinerelatedstevensjohnsonsyndromeinthailand AT prabhasawatpinnita associationofikzf1snpsincoldmedicinerelatedstevensjohnsonsyndromeinthailand AT suphapeetipornkanya associationofikzf1snpsincoldmedicinerelatedstevensjohnsonsyndromeinthailand AT kinoshitashigeru associationofikzf1snpsincoldmedicinerelatedstevensjohnsonsyndromeinthailand |