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Deep Learning–Based Survival Analysis Identified Associations Between Molecular Subtype and Optimal Adjuvant Treatment of Patients With Gastric Cancer

PURPOSE: Gastric cancer (GC) is the third-leading cause of cancer-related deaths. Several pivotal clinical trials of adjuvant treatments were performed during the previous decade; however, the optimal regimen for adjuvant treatment of GC remains controversial. PATIENTS AND METHODS: We developed a no...

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Autores principales: Lee, Jeeyun, An, Ji Yeong, Choi, Min Gew, Park, Se Hoon, Kim, Seung Tae, Lee, Jun Ho, Sohn, Tae Sung, Bae, Jae Moon, Kim, Sung, Lee, Hyuk, Min, Byung-Hoon, Kim, Jae J., Jeong, Woo Kyoung, Choi, Dong-Il, Kim, Kyoung-Mee, Kang, Won Ki, Kim, Mijung, Seo, Sung Wook
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society of Clinical Oncology 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6873983/
https://www.ncbi.nlm.nih.gov/pubmed/30652558
http://dx.doi.org/10.1200/CCI.17.00065
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author Lee, Jeeyun
An, Ji Yeong
Choi, Min Gew
Park, Se Hoon
Kim, Seung Tae
Lee, Jun Ho
Sohn, Tae Sung
Bae, Jae Moon
Kim, Sung
Lee, Hyuk
Min, Byung-Hoon
Kim, Jae J.
Jeong, Woo Kyoung
Choi, Dong-Il
Kim, Kyoung-Mee
Kang, Won Ki
Kim, Mijung
Seo, Sung Wook
author_facet Lee, Jeeyun
An, Ji Yeong
Choi, Min Gew
Park, Se Hoon
Kim, Seung Tae
Lee, Jun Ho
Sohn, Tae Sung
Bae, Jae Moon
Kim, Sung
Lee, Hyuk
Min, Byung-Hoon
Kim, Jae J.
Jeong, Woo Kyoung
Choi, Dong-Il
Kim, Kyoung-Mee
Kang, Won Ki
Kim, Mijung
Seo, Sung Wook
author_sort Lee, Jeeyun
collection PubMed
description PURPOSE: Gastric cancer (GC) is the third-leading cause of cancer-related deaths. Several pivotal clinical trials of adjuvant treatments were performed during the previous decade; however, the optimal regimen for adjuvant treatment of GC remains controversial. PATIENTS AND METHODS: We developed a novel deep learning–based survival model (survival recurrent network [SRN]) in patients with GC by including all available clinical and pathologic data and treatment regimens. This model uses time-sequential data only in the training step, and upon being trained, it receives the initial data from the first visit and then sequentially predicts the outcome at each time point until it reaches 5 years. In total, 1,190 patients from three cohorts (the Asian Cancer Research Group cohort, n = 300; the fluorouracil, leucovorin, and radiotherapy cohort, n = 432; and the Adjuvant Chemoradiation Therapy in Stomach Cancer cohort, n = 458) were included in the analysis. In addition, we added Asian Cancer Research Group molecular classifications into the prediction model. SRN simulated the sequential learning process of clinicians in the outpatient clinic using a recurrent neural network and time-sequential outcome data. RESULTS: The mean area under the receiver operating characteristics curve was 0.92 ± 0.049 at the fifth year. The SRN demonstrated that GC with a mesenchymal subtype should elicit a more risk-adapted postoperative treatment strategy as a result of its high recurrence rate. In addition, the SRN found that GCs with microsatellite instability and GCs of the papillary type exhibited significantly more favorable survival outcomes after capecitabine plus cisplatin chemotherapy alone. CONCLUSION: Our SRN predicted survival at a high rate, reaching 92% at postoperative year 5. Our findings suggest that SRN-based clinical trials or risk-adapted adjuvant trials could be considered for patients with GC to investigate more individualized adjuvant treatments after curative gastrectomy.
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spelling pubmed-68739832019-12-03 Deep Learning–Based Survival Analysis Identified Associations Between Molecular Subtype and Optimal Adjuvant Treatment of Patients With Gastric Cancer Lee, Jeeyun An, Ji Yeong Choi, Min Gew Park, Se Hoon Kim, Seung Tae Lee, Jun Ho Sohn, Tae Sung Bae, Jae Moon Kim, Sung Lee, Hyuk Min, Byung-Hoon Kim, Jae J. Jeong, Woo Kyoung Choi, Dong-Il Kim, Kyoung-Mee Kang, Won Ki Kim, Mijung Seo, Sung Wook JCO Clin Cancer Inform Original Reports PURPOSE: Gastric cancer (GC) is the third-leading cause of cancer-related deaths. Several pivotal clinical trials of adjuvant treatments were performed during the previous decade; however, the optimal regimen for adjuvant treatment of GC remains controversial. PATIENTS AND METHODS: We developed a novel deep learning–based survival model (survival recurrent network [SRN]) in patients with GC by including all available clinical and pathologic data and treatment regimens. This model uses time-sequential data only in the training step, and upon being trained, it receives the initial data from the first visit and then sequentially predicts the outcome at each time point until it reaches 5 years. In total, 1,190 patients from three cohorts (the Asian Cancer Research Group cohort, n = 300; the fluorouracil, leucovorin, and radiotherapy cohort, n = 432; and the Adjuvant Chemoradiation Therapy in Stomach Cancer cohort, n = 458) were included in the analysis. In addition, we added Asian Cancer Research Group molecular classifications into the prediction model. SRN simulated the sequential learning process of clinicians in the outpatient clinic using a recurrent neural network and time-sequential outcome data. RESULTS: The mean area under the receiver operating characteristics curve was 0.92 ± 0.049 at the fifth year. The SRN demonstrated that GC with a mesenchymal subtype should elicit a more risk-adapted postoperative treatment strategy as a result of its high recurrence rate. In addition, the SRN found that GCs with microsatellite instability and GCs of the papillary type exhibited significantly more favorable survival outcomes after capecitabine plus cisplatin chemotherapy alone. CONCLUSION: Our SRN predicted survival at a high rate, reaching 92% at postoperative year 5. Our findings suggest that SRN-based clinical trials or risk-adapted adjuvant trials could be considered for patients with GC to investigate more individualized adjuvant treatments after curative gastrectomy. American Society of Clinical Oncology 2018-03-14 /pmc/articles/PMC6873983/ /pubmed/30652558 http://dx.doi.org/10.1200/CCI.17.00065 Text en © 2018 by American Society of Clinical Oncology https://creativecommons.org/licenses/by/4.0/ Licensed under the Creative Commons Attribution 4.0 License: https://creativecommons.org/licenses/by/4.0/
spellingShingle Original Reports
Lee, Jeeyun
An, Ji Yeong
Choi, Min Gew
Park, Se Hoon
Kim, Seung Tae
Lee, Jun Ho
Sohn, Tae Sung
Bae, Jae Moon
Kim, Sung
Lee, Hyuk
Min, Byung-Hoon
Kim, Jae J.
Jeong, Woo Kyoung
Choi, Dong-Il
Kim, Kyoung-Mee
Kang, Won Ki
Kim, Mijung
Seo, Sung Wook
Deep Learning–Based Survival Analysis Identified Associations Between Molecular Subtype and Optimal Adjuvant Treatment of Patients With Gastric Cancer
title Deep Learning–Based Survival Analysis Identified Associations Between Molecular Subtype and Optimal Adjuvant Treatment of Patients With Gastric Cancer
title_full Deep Learning–Based Survival Analysis Identified Associations Between Molecular Subtype and Optimal Adjuvant Treatment of Patients With Gastric Cancer
title_fullStr Deep Learning–Based Survival Analysis Identified Associations Between Molecular Subtype and Optimal Adjuvant Treatment of Patients With Gastric Cancer
title_full_unstemmed Deep Learning–Based Survival Analysis Identified Associations Between Molecular Subtype and Optimal Adjuvant Treatment of Patients With Gastric Cancer
title_short Deep Learning–Based Survival Analysis Identified Associations Between Molecular Subtype and Optimal Adjuvant Treatment of Patients With Gastric Cancer
title_sort deep learning–based survival analysis identified associations between molecular subtype and optimal adjuvant treatment of patients with gastric cancer
topic Original Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6873983/
https://www.ncbi.nlm.nih.gov/pubmed/30652558
http://dx.doi.org/10.1200/CCI.17.00065
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