Cargando…

Discovery of stable and prognostic CT-based radiomic features independent of contrast administration and dimensionality in oesophageal cancer

The aim of this work was to investigate radiomic analysis of contrast and non-contrast enhanced planning CT images of oesophageal cancer (OC) patients in terms of stability, dimensionality and contrast agent dependency. The prognostic significance of CT-based radiomic features was also evaluated. Di...

Descripción completa

Detalles Bibliográficos
Autores principales: Piazzese, Concetta, Foley, Kieran, Whybra, Philip, Hurt, Chris, Crosby, Tom, Spezi, Emiliano
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6874382/
https://www.ncbi.nlm.nih.gov/pubmed/31756181
http://dx.doi.org/10.1371/journal.pone.0225550
_version_ 1783472827152728064
author Piazzese, Concetta
Foley, Kieran
Whybra, Philip
Hurt, Chris
Crosby, Tom
Spezi, Emiliano
author_facet Piazzese, Concetta
Foley, Kieran
Whybra, Philip
Hurt, Chris
Crosby, Tom
Spezi, Emiliano
author_sort Piazzese, Concetta
collection PubMed
description The aim of this work was to investigate radiomic analysis of contrast and non-contrast enhanced planning CT images of oesophageal cancer (OC) patients in terms of stability, dimensionality and contrast agent dependency. The prognostic significance of CT-based radiomic features was also evaluated. Different 2D and 3D radiomic features were extracted from contrast and non-contrast enhanced CT images of 213 patients from the multi-centre SCOPE1 randomised controlled trial (RCT) in OC. Feature stability was evaluated by randomly dividing patients into three groups and identifying textures with similar distributions among groups with a Kruskal-Wallis analysis. A paired two-sided Wilcoxon signed rank test was used to assess for significant differences in the remaining corresponding 2D and 3D stable features. A prognostic model was constructed using clinical characteristics and remaining filtered features. The discriminative ability of significant variables was tested using Kaplan-Meier analysis. A total of 238 2D and 3D radiomic features were computed from oesophageal CT images. More than 75 features were stable if extracted from homogeneous cohort (contrast or non-contrast enhanced CT images) and inhomogeneous cohort (contrast and non-contrast enhanced CT images). Among the remaining corresponding stable features computed from both cohorts, only 4 features did not show a statistically significant difference if obtained in 2D or in 3D (p-value < 0.05). A Cox regression model constructed using 5 clinical variables (age, sex, tumour, node and metastasis (TNM) stage, WHO performance status and contrast administration) and 4 radiomic variables (inverse variance(GLCM), large distance emphasis(GLDZM), zone distance non uniformity norm(GLDZM), zone distance variance(GLDZM)), identified one radiomic feature (zone distance variance(GLDZM)) that was significantly associated with overall survival (p-value = 0.032, HR = 1.25, 95% CI = 1.02–1.52). A significant difference in overall survival between groups was found when considering a threshold of zone distance variance(GLDZM) equals to 1.70 (X(2) = 7.692, df = 1, p-value = 0.006). Zone distance variance(GLDZM) was identified as the only stable CT radiomic feature statistically correlated with overall survival, independent of dimensionality and contrast administration. This feature was able to identify high-risk patients and if validated, could be the subject of a future clinical trial aiming to improve clinical decision making and personalise OC treatment.
format Online
Article
Text
id pubmed-6874382
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-68743822019-12-06 Discovery of stable and prognostic CT-based radiomic features independent of contrast administration and dimensionality in oesophageal cancer Piazzese, Concetta Foley, Kieran Whybra, Philip Hurt, Chris Crosby, Tom Spezi, Emiliano PLoS One Research Article The aim of this work was to investigate radiomic analysis of contrast and non-contrast enhanced planning CT images of oesophageal cancer (OC) patients in terms of stability, dimensionality and contrast agent dependency. The prognostic significance of CT-based radiomic features was also evaluated. Different 2D and 3D radiomic features were extracted from contrast and non-contrast enhanced CT images of 213 patients from the multi-centre SCOPE1 randomised controlled trial (RCT) in OC. Feature stability was evaluated by randomly dividing patients into three groups and identifying textures with similar distributions among groups with a Kruskal-Wallis analysis. A paired two-sided Wilcoxon signed rank test was used to assess for significant differences in the remaining corresponding 2D and 3D stable features. A prognostic model was constructed using clinical characteristics and remaining filtered features. The discriminative ability of significant variables was tested using Kaplan-Meier analysis. A total of 238 2D and 3D radiomic features were computed from oesophageal CT images. More than 75 features were stable if extracted from homogeneous cohort (contrast or non-contrast enhanced CT images) and inhomogeneous cohort (contrast and non-contrast enhanced CT images). Among the remaining corresponding stable features computed from both cohorts, only 4 features did not show a statistically significant difference if obtained in 2D or in 3D (p-value < 0.05). A Cox regression model constructed using 5 clinical variables (age, sex, tumour, node and metastasis (TNM) stage, WHO performance status and contrast administration) and 4 radiomic variables (inverse variance(GLCM), large distance emphasis(GLDZM), zone distance non uniformity norm(GLDZM), zone distance variance(GLDZM)), identified one radiomic feature (zone distance variance(GLDZM)) that was significantly associated with overall survival (p-value = 0.032, HR = 1.25, 95% CI = 1.02–1.52). A significant difference in overall survival between groups was found when considering a threshold of zone distance variance(GLDZM) equals to 1.70 (X(2) = 7.692, df = 1, p-value = 0.006). Zone distance variance(GLDZM) was identified as the only stable CT radiomic feature statistically correlated with overall survival, independent of dimensionality and contrast administration. This feature was able to identify high-risk patients and if validated, could be the subject of a future clinical trial aiming to improve clinical decision making and personalise OC treatment. Public Library of Science 2019-11-22 /pmc/articles/PMC6874382/ /pubmed/31756181 http://dx.doi.org/10.1371/journal.pone.0225550 Text en © 2019 Piazzese et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Piazzese, Concetta
Foley, Kieran
Whybra, Philip
Hurt, Chris
Crosby, Tom
Spezi, Emiliano
Discovery of stable and prognostic CT-based radiomic features independent of contrast administration and dimensionality in oesophageal cancer
title Discovery of stable and prognostic CT-based radiomic features independent of contrast administration and dimensionality in oesophageal cancer
title_full Discovery of stable and prognostic CT-based radiomic features independent of contrast administration and dimensionality in oesophageal cancer
title_fullStr Discovery of stable and prognostic CT-based radiomic features independent of contrast administration and dimensionality in oesophageal cancer
title_full_unstemmed Discovery of stable and prognostic CT-based radiomic features independent of contrast administration and dimensionality in oesophageal cancer
title_short Discovery of stable and prognostic CT-based radiomic features independent of contrast administration and dimensionality in oesophageal cancer
title_sort discovery of stable and prognostic ct-based radiomic features independent of contrast administration and dimensionality in oesophageal cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6874382/
https://www.ncbi.nlm.nih.gov/pubmed/31756181
http://dx.doi.org/10.1371/journal.pone.0225550
work_keys_str_mv AT piazzeseconcetta discoveryofstableandprognosticctbasedradiomicfeaturesindependentofcontrastadministrationanddimensionalityinoesophagealcancer
AT foleykieran discoveryofstableandprognosticctbasedradiomicfeaturesindependentofcontrastadministrationanddimensionalityinoesophagealcancer
AT whybraphilip discoveryofstableandprognosticctbasedradiomicfeaturesindependentofcontrastadministrationanddimensionalityinoesophagealcancer
AT hurtchris discoveryofstableandprognosticctbasedradiomicfeaturesindependentofcontrastadministrationanddimensionalityinoesophagealcancer
AT crosbytom discoveryofstableandprognosticctbasedradiomicfeaturesindependentofcontrastadministrationanddimensionalityinoesophagealcancer
AT speziemiliano discoveryofstableandprognosticctbasedradiomicfeaturesindependentofcontrastadministrationanddimensionalityinoesophagealcancer