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Deep Neural Network-Based Concentration Model for Oak Pollen Allergy Warning in South Korea
PURPOSE: Oak is the dominant tree species in Korea. Oak pollen has the highest sensitivity rate among all allergenic tree species in Korea. A deep neural network (DNN)-based estimation model was developed to determine the concentration of oak pollen and overcome the shortcomings of conventional regr...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Korean Academy of Asthma, Allergy and Clinical Immunology; The Korean Academy of Pediatric Allergy and Respiratory Disease
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6875477/ https://www.ncbi.nlm.nih.gov/pubmed/31743971 http://dx.doi.org/10.4168/aair.2020.12.1.149 |
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author | Seo, Yun Am Kim, Kyu Rang Cho, Changbum Oh, Jae-Won Kim, Tae Hee |
author_facet | Seo, Yun Am Kim, Kyu Rang Cho, Changbum Oh, Jae-Won Kim, Tae Hee |
author_sort | Seo, Yun Am |
collection | PubMed |
description | PURPOSE: Oak is the dominant tree species in Korea. Oak pollen has the highest sensitivity rate among all allergenic tree species in Korea. A deep neural network (DNN)-based estimation model was developed to determine the concentration of oak pollen and overcome the shortcomings of conventional regression models. METHODS: The DNN model proposed in this study utilized weather factors as the input and provided pollen concentrations as the output. Weather and pollen concentration data were used from 2007 to 2016 obtained from the Korea Meteorological Administration pollen observation network. Because it is difficult to prevent over-fitting and underestimation by using a DNN model alone, we developed a bootstrap aggregating-type ensemble model. Each of the 30 ensemble members was trained with random sampling at a fixed rate according to the pollen risk grade. To verify the effectiveness of the proposed model, we compared its performance with those of models of regression and support vector regression (SVR) under the same conditions, with respect to the prediction of pollen concentrations, risk levels, and season length. RESULTS: The mean absolute percentage error in the estimated pollen concentrations was 11.18%, 10.37%, and 5.04% for the regression, SVR and DNN models, respectively. The start of the pollen season was estimated to be 20, 22, and 6 days earlier than that predicted by the regression, SVR and DNN models, respectively. Similarly, the end of the pollen season was estimated to be 33, 20, and 9 days later that predicted by the regression, SVR and DNN models, respectively. CONCLUSIONS: Overall, the DNN model performed better than the other models. However, the prediction of peak pollen concentrations needs improvement. Improved observation quality with optimization of the DNN model will resolve this issue. |
format | Online Article Text |
id | pubmed-6875477 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | The Korean Academy of Asthma, Allergy and Clinical Immunology; The Korean Academy of Pediatric Allergy and Respiratory Disease |
record_format | MEDLINE/PubMed |
spelling | pubmed-68754772020-01-01 Deep Neural Network-Based Concentration Model for Oak Pollen Allergy Warning in South Korea Seo, Yun Am Kim, Kyu Rang Cho, Changbum Oh, Jae-Won Kim, Tae Hee Allergy Asthma Immunol Res Original Article PURPOSE: Oak is the dominant tree species in Korea. Oak pollen has the highest sensitivity rate among all allergenic tree species in Korea. A deep neural network (DNN)-based estimation model was developed to determine the concentration of oak pollen and overcome the shortcomings of conventional regression models. METHODS: The DNN model proposed in this study utilized weather factors as the input and provided pollen concentrations as the output. Weather and pollen concentration data were used from 2007 to 2016 obtained from the Korea Meteorological Administration pollen observation network. Because it is difficult to prevent over-fitting and underestimation by using a DNN model alone, we developed a bootstrap aggregating-type ensemble model. Each of the 30 ensemble members was trained with random sampling at a fixed rate according to the pollen risk grade. To verify the effectiveness of the proposed model, we compared its performance with those of models of regression and support vector regression (SVR) under the same conditions, with respect to the prediction of pollen concentrations, risk levels, and season length. RESULTS: The mean absolute percentage error in the estimated pollen concentrations was 11.18%, 10.37%, and 5.04% for the regression, SVR and DNN models, respectively. The start of the pollen season was estimated to be 20, 22, and 6 days earlier than that predicted by the regression, SVR and DNN models, respectively. Similarly, the end of the pollen season was estimated to be 33, 20, and 9 days later that predicted by the regression, SVR and DNN models, respectively. CONCLUSIONS: Overall, the DNN model performed better than the other models. However, the prediction of peak pollen concentrations needs improvement. Improved observation quality with optimization of the DNN model will resolve this issue. The Korean Academy of Asthma, Allergy and Clinical Immunology; The Korean Academy of Pediatric Allergy and Respiratory Disease 2019-10-07 /pmc/articles/PMC6875477/ /pubmed/31743971 http://dx.doi.org/10.4168/aair.2020.12.1.149 Text en Copyright © 2020 The Korean Academy of Asthma, Allergy and Clinical Immunology • The Korean Academy of Pediatric Allergy and Respiratory Disease https://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Seo, Yun Am Kim, Kyu Rang Cho, Changbum Oh, Jae-Won Kim, Tae Hee Deep Neural Network-Based Concentration Model for Oak Pollen Allergy Warning in South Korea |
title | Deep Neural Network-Based Concentration Model for Oak Pollen Allergy Warning in South Korea |
title_full | Deep Neural Network-Based Concentration Model for Oak Pollen Allergy Warning in South Korea |
title_fullStr | Deep Neural Network-Based Concentration Model for Oak Pollen Allergy Warning in South Korea |
title_full_unstemmed | Deep Neural Network-Based Concentration Model for Oak Pollen Allergy Warning in South Korea |
title_short | Deep Neural Network-Based Concentration Model for Oak Pollen Allergy Warning in South Korea |
title_sort | deep neural network-based concentration model for oak pollen allergy warning in south korea |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6875477/ https://www.ncbi.nlm.nih.gov/pubmed/31743971 http://dx.doi.org/10.4168/aair.2020.12.1.149 |
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