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Strategies to optimize modeling habitat suitability of Bertholletia excelsa in the Pan‐Amazonia

AIM: Amazon‐nut (Bertholletia excelsa) is a hyperdominant and protected tree species, playing a keystone role in nutrient cycling and ecosystem service provision in Amazonia. Our main goal was to develop a robust habitat suitability model of Amazon‐nut and to identify the most important predictor va...

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Autores principales: Tourne, Daiana C. M., Ballester, Maria V. R., James, Patrick M. A., Martorano, Lucieta G., Guedes, Marcelino Carneiro, Thomas, Evert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6875584/
https://www.ncbi.nlm.nih.gov/pubmed/31788202
http://dx.doi.org/10.1002/ece3.5726
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author Tourne, Daiana C. M.
Ballester, Maria V. R.
James, Patrick M. A.
Martorano, Lucieta G.
Guedes, Marcelino Carneiro
Thomas, Evert
author_facet Tourne, Daiana C. M.
Ballester, Maria V. R.
James, Patrick M. A.
Martorano, Lucieta G.
Guedes, Marcelino Carneiro
Thomas, Evert
author_sort Tourne, Daiana C. M.
collection PubMed
description AIM: Amazon‐nut (Bertholletia excelsa) is a hyperdominant and protected tree species, playing a keystone role in nutrient cycling and ecosystem service provision in Amazonia. Our main goal was to develop a robust habitat suitability model of Amazon‐nut and to identify the most important predictor variables to support conservation and tree planting decisions. LOCALIZATION: Amazon region, South America. METHODS: We collected 3,325 unique Amazon‐nut records and assembled >100 spatial predictor variables organized across climatic, edaphic, and geophysical categories. We compared suitability models using variables (a) selected through statistical techniques; (b) recommended by experts; and (c) integrating both approaches (a and b). We applied different spatial filtering scenarios to reduce overfitting. We additionally fine‐tuned MAXENT settings to our data. The best model was selected through quantitative and qualitative assessments. RESULTS: Principal component analysis based on expert recommendations was the most appropriate method for predictor selection. Elevation, coarse soil fragments, clay, slope, and annual potential evapotranspiration were the most important predictors. Their relative contribution to the best model amounted to 75%. Filtering of the presences within a radius of 10 km displayed lowest overfitting, a satisfactory omission rate and the most symmetric distribution curve. Our findings suggest that under current environmental conditions, suitable habitat for Amazon‐nut is found across 2.3 million km(2), that is, 32% of the Amazon Biome. MAIN CONCLUSION: The combination of statistical techniques with expert knowledge improved the quality of our suitability model. Topographic and soil variables were the most important predictors. The combination of predictor variable selection, fine‐tuning of model parameters and spatial filtering was critical for the construction of a reliable habitat suitability model.
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spelling pubmed-68755842019-11-29 Strategies to optimize modeling habitat suitability of Bertholletia excelsa in the Pan‐Amazonia Tourne, Daiana C. M. Ballester, Maria V. R. James, Patrick M. A. Martorano, Lucieta G. Guedes, Marcelino Carneiro Thomas, Evert Ecol Evol Original Research AIM: Amazon‐nut (Bertholletia excelsa) is a hyperdominant and protected tree species, playing a keystone role in nutrient cycling and ecosystem service provision in Amazonia. Our main goal was to develop a robust habitat suitability model of Amazon‐nut and to identify the most important predictor variables to support conservation and tree planting decisions. LOCALIZATION: Amazon region, South America. METHODS: We collected 3,325 unique Amazon‐nut records and assembled >100 spatial predictor variables organized across climatic, edaphic, and geophysical categories. We compared suitability models using variables (a) selected through statistical techniques; (b) recommended by experts; and (c) integrating both approaches (a and b). We applied different spatial filtering scenarios to reduce overfitting. We additionally fine‐tuned MAXENT settings to our data. The best model was selected through quantitative and qualitative assessments. RESULTS: Principal component analysis based on expert recommendations was the most appropriate method for predictor selection. Elevation, coarse soil fragments, clay, slope, and annual potential evapotranspiration were the most important predictors. Their relative contribution to the best model amounted to 75%. Filtering of the presences within a radius of 10 km displayed lowest overfitting, a satisfactory omission rate and the most symmetric distribution curve. Our findings suggest that under current environmental conditions, suitable habitat for Amazon‐nut is found across 2.3 million km(2), that is, 32% of the Amazon Biome. MAIN CONCLUSION: The combination of statistical techniques with expert knowledge improved the quality of our suitability model. Topographic and soil variables were the most important predictors. The combination of predictor variable selection, fine‐tuning of model parameters and spatial filtering was critical for the construction of a reliable habitat suitability model. John Wiley and Sons Inc. 2019-10-25 /pmc/articles/PMC6875584/ /pubmed/31788202 http://dx.doi.org/10.1002/ece3.5726 Text en © 2019 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Tourne, Daiana C. M.
Ballester, Maria V. R.
James, Patrick M. A.
Martorano, Lucieta G.
Guedes, Marcelino Carneiro
Thomas, Evert
Strategies to optimize modeling habitat suitability of Bertholletia excelsa in the Pan‐Amazonia
title Strategies to optimize modeling habitat suitability of Bertholletia excelsa in the Pan‐Amazonia
title_full Strategies to optimize modeling habitat suitability of Bertholletia excelsa in the Pan‐Amazonia
title_fullStr Strategies to optimize modeling habitat suitability of Bertholletia excelsa in the Pan‐Amazonia
title_full_unstemmed Strategies to optimize modeling habitat suitability of Bertholletia excelsa in the Pan‐Amazonia
title_short Strategies to optimize modeling habitat suitability of Bertholletia excelsa in the Pan‐Amazonia
title_sort strategies to optimize modeling habitat suitability of bertholletia excelsa in the pan‐amazonia
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6875584/
https://www.ncbi.nlm.nih.gov/pubmed/31788202
http://dx.doi.org/10.1002/ece3.5726
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