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DNA methylation aging clocks: challenges and recommendations

Epigenetic clocks comprise a set of CpG sites whose DNA methylation levels measure subject age. These clocks are acknowledged as a highly accurate molecular correlate of chronological age in humans and other vertebrates. Also, extensive research is aimed at their potential to quantify biological agi...

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Autores principales: Bell, Christopher G., Lowe, Robert, Adams, Peter D., Baccarelli, Andrea A., Beck, Stephan, Bell, Jordana T., Christensen, Brock C., Gladyshev, Vadim N., Heijmans, Bastiaan T., Horvath, Steve, Ideker, Trey, Issa, Jean-Pierre J., Kelsey, Karl T., Marioni, Riccardo E., Reik, Wolf, Relton, Caroline L., Schalkwyk, Leonard C., Teschendorff, Andrew E., Wagner, Wolfgang, Zhang, Kang, Rakyan, Vardhman K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6876109/
https://www.ncbi.nlm.nih.gov/pubmed/31767039
http://dx.doi.org/10.1186/s13059-019-1824-y
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author Bell, Christopher G.
Lowe, Robert
Adams, Peter D.
Baccarelli, Andrea A.
Beck, Stephan
Bell, Jordana T.
Christensen, Brock C.
Gladyshev, Vadim N.
Heijmans, Bastiaan T.
Horvath, Steve
Ideker, Trey
Issa, Jean-Pierre J.
Kelsey, Karl T.
Marioni, Riccardo E.
Reik, Wolf
Relton, Caroline L.
Schalkwyk, Leonard C.
Teschendorff, Andrew E.
Wagner, Wolfgang
Zhang, Kang
Rakyan, Vardhman K.
author_facet Bell, Christopher G.
Lowe, Robert
Adams, Peter D.
Baccarelli, Andrea A.
Beck, Stephan
Bell, Jordana T.
Christensen, Brock C.
Gladyshev, Vadim N.
Heijmans, Bastiaan T.
Horvath, Steve
Ideker, Trey
Issa, Jean-Pierre J.
Kelsey, Karl T.
Marioni, Riccardo E.
Reik, Wolf
Relton, Caroline L.
Schalkwyk, Leonard C.
Teschendorff, Andrew E.
Wagner, Wolfgang
Zhang, Kang
Rakyan, Vardhman K.
author_sort Bell, Christopher G.
collection PubMed
description Epigenetic clocks comprise a set of CpG sites whose DNA methylation levels measure subject age. These clocks are acknowledged as a highly accurate molecular correlate of chronological age in humans and other vertebrates. Also, extensive research is aimed at their potential to quantify biological aging rates and test longevity or rejuvenating interventions. Here, we discuss key challenges to understand clock mechanisms and biomarker utility. This requires dissecting the drivers and regulators of age-related changes in single-cell, tissue- and disease-specific models, as well as exploring other epigenomic marks, longitudinal and diverse population studies, and non-human models. We also highlight important ethical issues in forensic age determination and predicting the trajectory of biological aging in an individual.
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spelling pubmed-68761092019-11-29 DNA methylation aging clocks: challenges and recommendations Bell, Christopher G. Lowe, Robert Adams, Peter D. Baccarelli, Andrea A. Beck, Stephan Bell, Jordana T. Christensen, Brock C. Gladyshev, Vadim N. Heijmans, Bastiaan T. Horvath, Steve Ideker, Trey Issa, Jean-Pierre J. Kelsey, Karl T. Marioni, Riccardo E. Reik, Wolf Relton, Caroline L. Schalkwyk, Leonard C. Teschendorff, Andrew E. Wagner, Wolfgang Zhang, Kang Rakyan, Vardhman K. Genome Biol Review Epigenetic clocks comprise a set of CpG sites whose DNA methylation levels measure subject age. These clocks are acknowledged as a highly accurate molecular correlate of chronological age in humans and other vertebrates. Also, extensive research is aimed at their potential to quantify biological aging rates and test longevity or rejuvenating interventions. Here, we discuss key challenges to understand clock mechanisms and biomarker utility. This requires dissecting the drivers and regulators of age-related changes in single-cell, tissue- and disease-specific models, as well as exploring other epigenomic marks, longitudinal and diverse population studies, and non-human models. We also highlight important ethical issues in forensic age determination and predicting the trajectory of biological aging in an individual. BioMed Central 2019-11-25 /pmc/articles/PMC6876109/ /pubmed/31767039 http://dx.doi.org/10.1186/s13059-019-1824-y Text en © The Author(s). 2019 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Review
Bell, Christopher G.
Lowe, Robert
Adams, Peter D.
Baccarelli, Andrea A.
Beck, Stephan
Bell, Jordana T.
Christensen, Brock C.
Gladyshev, Vadim N.
Heijmans, Bastiaan T.
Horvath, Steve
Ideker, Trey
Issa, Jean-Pierre J.
Kelsey, Karl T.
Marioni, Riccardo E.
Reik, Wolf
Relton, Caroline L.
Schalkwyk, Leonard C.
Teschendorff, Andrew E.
Wagner, Wolfgang
Zhang, Kang
Rakyan, Vardhman K.
DNA methylation aging clocks: challenges and recommendations
title DNA methylation aging clocks: challenges and recommendations
title_full DNA methylation aging clocks: challenges and recommendations
title_fullStr DNA methylation aging clocks: challenges and recommendations
title_full_unstemmed DNA methylation aging clocks: challenges and recommendations
title_short DNA methylation aging clocks: challenges and recommendations
title_sort dna methylation aging clocks: challenges and recommendations
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6876109/
https://www.ncbi.nlm.nih.gov/pubmed/31767039
http://dx.doi.org/10.1186/s13059-019-1824-y
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