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Discrimination of Movement-Related Cortical Potentials Exploiting Unsupervised Learned Representations From ECoGs

Brain–Computer Interfaces (BCI) aim to bypass the peripheral nervous system to link the brain to external devices via successful modeling of decoding mechanisms. BCI based on electrocorticogram or ECoG represent a viable compromise between clinical practicality, spatial resolution, and signal qualit...

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Autores principales: Loza, Carlos A., Reddy, Chandan G., Akella, Shailaja, Príncipe, José C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6882771/
https://www.ncbi.nlm.nih.gov/pubmed/31824249
http://dx.doi.org/10.3389/fnins.2019.01248
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author Loza, Carlos A.
Reddy, Chandan G.
Akella, Shailaja
Príncipe, José C.
author_facet Loza, Carlos A.
Reddy, Chandan G.
Akella, Shailaja
Príncipe, José C.
author_sort Loza, Carlos A.
collection PubMed
description Brain–Computer Interfaces (BCI) aim to bypass the peripheral nervous system to link the brain to external devices via successful modeling of decoding mechanisms. BCI based on electrocorticogram or ECoG represent a viable compromise between clinical practicality, spatial resolution, and signal quality when it comes to extracellular electrical potentials from local neuronal assemblies. Classic analysis of ECoG traces usually falls under the umbrella of Time-Frequency decompositions with adaptations from Fourier analysis and wavelets as its most prominent variants. However, analyzing such high-dimensional, multivariate time series demands for specialized signal processing and neurophysiological principles. We propose a generative model for single-channel ECoGs that is able to fully characterize reoccurring rhythm–specific neuromodulations as weighted activations of prototypical templates over time. The set of timings, weights and indexes comprise a temporal marked point process (TMPP) that accesses a set of bases from vector spaces of different dimensions—a dictionary. The shallow nature of the model admits the equivalence between latent variables and representations. In this way, learning the model parameters is a case of unsupervised representation learning. We exploit principles of Minimum Description Length (MDL) encoding to effectively yield a data-driven framework where prototypical neuromodulations (not restricted to a particular duration) can be estimated alongside the timings and features of the TMPP. We validate the proposed methodology on discrimination of movement-related tasks utilizing 32-electrode grids implanted in the frontal cortex of six epileptic subjects. We show that the learned representations from the high-gamma band (85–145 Hz) are not only interpretable, but also discriminant in a lower dimensional space. The results also underscore the practicality of our algorithm, i.e., 2 main hyperparameters that can be readily set via neurophysiology, and emphasize the need of principled and interpretable representation learning in order to model encoding mechanisms in the brain.
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spelling pubmed-68827712019-12-10 Discrimination of Movement-Related Cortical Potentials Exploiting Unsupervised Learned Representations From ECoGs Loza, Carlos A. Reddy, Chandan G. Akella, Shailaja Príncipe, José C. Front Neurosci Neuroscience Brain–Computer Interfaces (BCI) aim to bypass the peripheral nervous system to link the brain to external devices via successful modeling of decoding mechanisms. BCI based on electrocorticogram or ECoG represent a viable compromise between clinical practicality, spatial resolution, and signal quality when it comes to extracellular electrical potentials from local neuronal assemblies. Classic analysis of ECoG traces usually falls under the umbrella of Time-Frequency decompositions with adaptations from Fourier analysis and wavelets as its most prominent variants. However, analyzing such high-dimensional, multivariate time series demands for specialized signal processing and neurophysiological principles. We propose a generative model for single-channel ECoGs that is able to fully characterize reoccurring rhythm–specific neuromodulations as weighted activations of prototypical templates over time. The set of timings, weights and indexes comprise a temporal marked point process (TMPP) that accesses a set of bases from vector spaces of different dimensions—a dictionary. The shallow nature of the model admits the equivalence between latent variables and representations. In this way, learning the model parameters is a case of unsupervised representation learning. We exploit principles of Minimum Description Length (MDL) encoding to effectively yield a data-driven framework where prototypical neuromodulations (not restricted to a particular duration) can be estimated alongside the timings and features of the TMPP. We validate the proposed methodology on discrimination of movement-related tasks utilizing 32-electrode grids implanted in the frontal cortex of six epileptic subjects. We show that the learned representations from the high-gamma band (85–145 Hz) are not only interpretable, but also discriminant in a lower dimensional space. The results also underscore the practicality of our algorithm, i.e., 2 main hyperparameters that can be readily set via neurophysiology, and emphasize the need of principled and interpretable representation learning in order to model encoding mechanisms in the brain. Frontiers Media S.A. 2019-11-22 /pmc/articles/PMC6882771/ /pubmed/31824249 http://dx.doi.org/10.3389/fnins.2019.01248 Text en Copyright © 2019 Loza, Reddy, Akella and Príncipe. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Loza, Carlos A.
Reddy, Chandan G.
Akella, Shailaja
Príncipe, José C.
Discrimination of Movement-Related Cortical Potentials Exploiting Unsupervised Learned Representations From ECoGs
title Discrimination of Movement-Related Cortical Potentials Exploiting Unsupervised Learned Representations From ECoGs
title_full Discrimination of Movement-Related Cortical Potentials Exploiting Unsupervised Learned Representations From ECoGs
title_fullStr Discrimination of Movement-Related Cortical Potentials Exploiting Unsupervised Learned Representations From ECoGs
title_full_unstemmed Discrimination of Movement-Related Cortical Potentials Exploiting Unsupervised Learned Representations From ECoGs
title_short Discrimination of Movement-Related Cortical Potentials Exploiting Unsupervised Learned Representations From ECoGs
title_sort discrimination of movement-related cortical potentials exploiting unsupervised learned representations from ecogs
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6882771/
https://www.ncbi.nlm.nih.gov/pubmed/31824249
http://dx.doi.org/10.3389/fnins.2019.01248
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