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NV center based nano-NMR enhanced by deep learning
The growing field of nano nuclear magnetic resonance (nano-NMR) seeks to estimate spectra or discriminate between spectra of minuscule amounts of complex molecules. While this field holds great promise, nano-NMR experiments suffer from detrimental inherent noise. This strong noise masks to the weak...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6882844/ https://www.ncbi.nlm.nih.gov/pubmed/31780783 http://dx.doi.org/10.1038/s41598-019-54119-9 |
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author | Aharon, Nati Rotem, Amit McGuinness, Liam P. Jelezko, Fedor Retzker, Alex Ringel, Zohar |
author_facet | Aharon, Nati Rotem, Amit McGuinness, Liam P. Jelezko, Fedor Retzker, Alex Ringel, Zohar |
author_sort | Aharon, Nati |
collection | PubMed |
description | The growing field of nano nuclear magnetic resonance (nano-NMR) seeks to estimate spectra or discriminate between spectra of minuscule amounts of complex molecules. While this field holds great promise, nano-NMR experiments suffer from detrimental inherent noise. This strong noise masks to the weak signal and results in a very low signal-to-noise ratio. Moreover, the noise model is usually complex and unknown, which renders the data processing of the measurement results very complicated. Hence, spectra discrimination is hard to achieve and in particular, it is difficult to reach the optimal discrimination. In this work we present strong indications that this difficulty can be overcome by deep learning (DL) algorithms. The DL algorithms can mitigate the adversarial effects of the noise efficiently by effectively learning the noise model. We show that in the case of frequency discrimination DL algorithms reach the optimal discrimination without having any pre-knowledge of the physical model. Moreover, the DL discrimination scheme outperform Bayesian methods when verified on noisy experimental data obtained by a single Nitrogen-Vacancy (NV) center. In the case of frequency resolution we show that this approach outperforms Bayesian methods even when the latter have full pre-knowledge of the noise model and the former has none. These DL algorithms also emerge as much more efficient in terms of computational resources and run times. Since in many real-world scenarios the noise is complex and difficult to model, we argue that DL is likely to become a dominant tool in the field. |
format | Online Article Text |
id | pubmed-6882844 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-68828442019-12-06 NV center based nano-NMR enhanced by deep learning Aharon, Nati Rotem, Amit McGuinness, Liam P. Jelezko, Fedor Retzker, Alex Ringel, Zohar Sci Rep Article The growing field of nano nuclear magnetic resonance (nano-NMR) seeks to estimate spectra or discriminate between spectra of minuscule amounts of complex molecules. While this field holds great promise, nano-NMR experiments suffer from detrimental inherent noise. This strong noise masks to the weak signal and results in a very low signal-to-noise ratio. Moreover, the noise model is usually complex and unknown, which renders the data processing of the measurement results very complicated. Hence, spectra discrimination is hard to achieve and in particular, it is difficult to reach the optimal discrimination. In this work we present strong indications that this difficulty can be overcome by deep learning (DL) algorithms. The DL algorithms can mitigate the adversarial effects of the noise efficiently by effectively learning the noise model. We show that in the case of frequency discrimination DL algorithms reach the optimal discrimination without having any pre-knowledge of the physical model. Moreover, the DL discrimination scheme outperform Bayesian methods when verified on noisy experimental data obtained by a single Nitrogen-Vacancy (NV) center. In the case of frequency resolution we show that this approach outperforms Bayesian methods even when the latter have full pre-knowledge of the noise model and the former has none. These DL algorithms also emerge as much more efficient in terms of computational resources and run times. Since in many real-world scenarios the noise is complex and difficult to model, we argue that DL is likely to become a dominant tool in the field. Nature Publishing Group UK 2019-11-28 /pmc/articles/PMC6882844/ /pubmed/31780783 http://dx.doi.org/10.1038/s41598-019-54119-9 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Aharon, Nati Rotem, Amit McGuinness, Liam P. Jelezko, Fedor Retzker, Alex Ringel, Zohar NV center based nano-NMR enhanced by deep learning |
title | NV center based nano-NMR enhanced by deep learning |
title_full | NV center based nano-NMR enhanced by deep learning |
title_fullStr | NV center based nano-NMR enhanced by deep learning |
title_full_unstemmed | NV center based nano-NMR enhanced by deep learning |
title_short | NV center based nano-NMR enhanced by deep learning |
title_sort | nv center based nano-nmr enhanced by deep learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6882844/ https://www.ncbi.nlm.nih.gov/pubmed/31780783 http://dx.doi.org/10.1038/s41598-019-54119-9 |
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