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Liver tumor segmentation in CT volumes using an adversarial densely connected network

BACKGROUND: Malignant liver tumor is one of the main causes of human death. In order to help physician better diagnose and make personalized treatment schemes, in clinical practice, it is often necessary to segment and visualize the liver tumor from abdominal computed tomography images. Due to the l...

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Autores principales: Chen, Lei, Song, Hong, Wang, Chi, Cui, Yutao, Yang, Jian, Hu, Xiaohua, Zhang, Le
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6886252/
https://www.ncbi.nlm.nih.gov/pubmed/31787071
http://dx.doi.org/10.1186/s12859-019-3069-x
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author Chen, Lei
Song, Hong
Wang, Chi
Cui, Yutao
Yang, Jian
Hu, Xiaohua
Zhang, Le
author_facet Chen, Lei
Song, Hong
Wang, Chi
Cui, Yutao
Yang, Jian
Hu, Xiaohua
Zhang, Le
author_sort Chen, Lei
collection PubMed
description BACKGROUND: Malignant liver tumor is one of the main causes of human death. In order to help physician better diagnose and make personalized treatment schemes, in clinical practice, it is often necessary to segment and visualize the liver tumor from abdominal computed tomography images. Due to the large number of slices in computed tomography sequence, developing an automatic and reliable segmentation method is very favored by physicians. However, because of the noise existed in the scan sequence and the similar pixel intensity of liver tumors with their surrounding tissues, besides, the size, position and shape of tumors also vary from one patient to another, automatic liver tumor segmentation is still a difficult task. RESULTS: We perform the proposed algorithm to the Liver Tumor Segmentation Challenge dataset and evaluate the segmentation results. Experimental results reveal that the proposed method achieved an average Dice score of 68.4% for tumor segmentation by using the designed network, and ASD, MSD, VOE and RVD improved from 27.8 to 21, 147 to 124, 0.52 to 0.46 and 0.69 to 0.73, respectively after performing adversarial training strategy, which proved the effectiveness of the proposed method. CONCLUSIONS: The testing results show that the proposed method achieves improved performance, which corroborated the adversarial training based strategy can achieve more accurate and robustness results on liver tumor segmentation task.
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spelling pubmed-68862522019-12-11 Liver tumor segmentation in CT volumes using an adversarial densely connected network Chen, Lei Song, Hong Wang, Chi Cui, Yutao Yang, Jian Hu, Xiaohua Zhang, Le BMC Bioinformatics Research BACKGROUND: Malignant liver tumor is one of the main causes of human death. In order to help physician better diagnose and make personalized treatment schemes, in clinical practice, it is often necessary to segment and visualize the liver tumor from abdominal computed tomography images. Due to the large number of slices in computed tomography sequence, developing an automatic and reliable segmentation method is very favored by physicians. However, because of the noise existed in the scan sequence and the similar pixel intensity of liver tumors with their surrounding tissues, besides, the size, position and shape of tumors also vary from one patient to another, automatic liver tumor segmentation is still a difficult task. RESULTS: We perform the proposed algorithm to the Liver Tumor Segmentation Challenge dataset and evaluate the segmentation results. Experimental results reveal that the proposed method achieved an average Dice score of 68.4% for tumor segmentation by using the designed network, and ASD, MSD, VOE and RVD improved from 27.8 to 21, 147 to 124, 0.52 to 0.46 and 0.69 to 0.73, respectively after performing adversarial training strategy, which proved the effectiveness of the proposed method. CONCLUSIONS: The testing results show that the proposed method achieves improved performance, which corroborated the adversarial training based strategy can achieve more accurate and robustness results on liver tumor segmentation task. BioMed Central 2019-12-02 /pmc/articles/PMC6886252/ /pubmed/31787071 http://dx.doi.org/10.1186/s12859-019-3069-x Text en © The Author(s) 2019 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License(http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Chen, Lei
Song, Hong
Wang, Chi
Cui, Yutao
Yang, Jian
Hu, Xiaohua
Zhang, Le
Liver tumor segmentation in CT volumes using an adversarial densely connected network
title Liver tumor segmentation in CT volumes using an adversarial densely connected network
title_full Liver tumor segmentation in CT volumes using an adversarial densely connected network
title_fullStr Liver tumor segmentation in CT volumes using an adversarial densely connected network
title_full_unstemmed Liver tumor segmentation in CT volumes using an adversarial densely connected network
title_short Liver tumor segmentation in CT volumes using an adversarial densely connected network
title_sort liver tumor segmentation in ct volumes using an adversarial densely connected network
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6886252/
https://www.ncbi.nlm.nih.gov/pubmed/31787071
http://dx.doi.org/10.1186/s12859-019-3069-x
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