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(1)H-NMR spectroscopy identifies potential biomarkers in serum metabolomic signatures for early stage esophageal squamous cell carcinoma

BACKGROUND: Esophageal squamous cell carcinoma (ESCC) is one of the most prevalent types of upper gastrointestinal malignancies. Here, we used (1)H nuclear magnetic resonance spectroscopy ((1)H-NMR) to identify potential serum biomarkers in patients with early stage ESCC. METHODS: Sixty-five serum s...

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Autores principales: Liu, Yan-Yan, Yang, Zhong-Xian, Ma, Li-Min, Wen, Xu-Qing, Ji, Huan-Lin, Li, Ke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6886491/
https://www.ncbi.nlm.nih.gov/pubmed/31803539
http://dx.doi.org/10.7717/peerj.8151
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author Liu, Yan-Yan
Yang, Zhong-Xian
Ma, Li-Min
Wen, Xu-Qing
Ji, Huan-Lin
Li, Ke
author_facet Liu, Yan-Yan
Yang, Zhong-Xian
Ma, Li-Min
Wen, Xu-Qing
Ji, Huan-Lin
Li, Ke
author_sort Liu, Yan-Yan
collection PubMed
description BACKGROUND: Esophageal squamous cell carcinoma (ESCC) is one of the most prevalent types of upper gastrointestinal malignancies. Here, we used (1)H nuclear magnetic resonance spectroscopy ((1)H-NMR) to identify potential serum biomarkers in patients with early stage ESCC. METHODS: Sixty-five serum samples from early stage ESCC patients (n = 25) and healthy controls (n = 40) were analysed using (1)H-NMR spectroscopy. We distinguished between different metabolites through principal component analysis, partial least squares-discriminant analysis, and orthogonal partial least squares-discriminant analysis (OPLS-DA) using SIMCA-P+ version 14.0 software. Receiver operating characteristic (ROC) analysis was conducted to verify potential biomarkers. RESULTS: Using OPLS-DA, 31 altered serum metabolites were successfully identified between the groups. Based on the area under the ROC curve (AUROC), and the biomarker panel with AUROC of 0.969, six serum metabolites (α-glucose, choline, glutamine, glutamate, valine, and dihydrothymine) were selected as potential biomarkers for early stage ESCC. Dihydrothymine particularly was selected as a new feasible biomarker associated with tumor occurrence. CONCLUSIONS: (1)H-NMR spectroscopy may be a useful tumour detection approach in identifying useful metabolic ESCC biomarkers for early diagnosis and in the exploration of the molecular pathogenesis of ESCC.
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spelling pubmed-68864912019-12-04 (1)H-NMR spectroscopy identifies potential biomarkers in serum metabolomic signatures for early stage esophageal squamous cell carcinoma Liu, Yan-Yan Yang, Zhong-Xian Ma, Li-Min Wen, Xu-Qing Ji, Huan-Lin Li, Ke PeerJ Biochemistry BACKGROUND: Esophageal squamous cell carcinoma (ESCC) is one of the most prevalent types of upper gastrointestinal malignancies. Here, we used (1)H nuclear magnetic resonance spectroscopy ((1)H-NMR) to identify potential serum biomarkers in patients with early stage ESCC. METHODS: Sixty-five serum samples from early stage ESCC patients (n = 25) and healthy controls (n = 40) were analysed using (1)H-NMR spectroscopy. We distinguished between different metabolites through principal component analysis, partial least squares-discriminant analysis, and orthogonal partial least squares-discriminant analysis (OPLS-DA) using SIMCA-P+ version 14.0 software. Receiver operating characteristic (ROC) analysis was conducted to verify potential biomarkers. RESULTS: Using OPLS-DA, 31 altered serum metabolites were successfully identified between the groups. Based on the area under the ROC curve (AUROC), and the biomarker panel with AUROC of 0.969, six serum metabolites (α-glucose, choline, glutamine, glutamate, valine, and dihydrothymine) were selected as potential biomarkers for early stage ESCC. Dihydrothymine particularly was selected as a new feasible biomarker associated with tumor occurrence. CONCLUSIONS: (1)H-NMR spectroscopy may be a useful tumour detection approach in identifying useful metabolic ESCC biomarkers for early diagnosis and in the exploration of the molecular pathogenesis of ESCC. PeerJ Inc. 2019-11-29 /pmc/articles/PMC6886491/ /pubmed/31803539 http://dx.doi.org/10.7717/peerj.8151 Text en ©2019 Liu et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Biochemistry
Liu, Yan-Yan
Yang, Zhong-Xian
Ma, Li-Min
Wen, Xu-Qing
Ji, Huan-Lin
Li, Ke
(1)H-NMR spectroscopy identifies potential biomarkers in serum metabolomic signatures for early stage esophageal squamous cell carcinoma
title (1)H-NMR spectroscopy identifies potential biomarkers in serum metabolomic signatures for early stage esophageal squamous cell carcinoma
title_full (1)H-NMR spectroscopy identifies potential biomarkers in serum metabolomic signatures for early stage esophageal squamous cell carcinoma
title_fullStr (1)H-NMR spectroscopy identifies potential biomarkers in serum metabolomic signatures for early stage esophageal squamous cell carcinoma
title_full_unstemmed (1)H-NMR spectroscopy identifies potential biomarkers in serum metabolomic signatures for early stage esophageal squamous cell carcinoma
title_short (1)H-NMR spectroscopy identifies potential biomarkers in serum metabolomic signatures for early stage esophageal squamous cell carcinoma
title_sort (1)h-nmr spectroscopy identifies potential biomarkers in serum metabolomic signatures for early stage esophageal squamous cell carcinoma
topic Biochemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6886491/
https://www.ncbi.nlm.nih.gov/pubmed/31803539
http://dx.doi.org/10.7717/peerj.8151
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