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Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study
OBJECTIVE: This project aimed to develop and propose a standardised reporting guideline for kidney disease research and clinical data reporting, in order to improve kidney disease data quality and integrity, and combat challenges associated with the management and challenges of ‘Big Data’. METHODS:...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BMJ Publishing Group
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6887010/ https://www.ncbi.nlm.nih.gov/pubmed/31772086 http://dx.doi.org/10.1136/bmjopen-2019-029539 |
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author | Kumuthini, Judit van Woerden, Christiaan Mallett, Andrew Zass, Lyndon Chaouch, Melek Thompson, Michael Johnston, Katherine Mbiyavanga, Mamana Baichoo, Shakuntala Mungloo-Dilmohamud, Zahra Patel, Chirag Mulder, Nicola |
author_facet | Kumuthini, Judit van Woerden, Christiaan Mallett, Andrew Zass, Lyndon Chaouch, Melek Thompson, Michael Johnston, Katherine Mbiyavanga, Mamana Baichoo, Shakuntala Mungloo-Dilmohamud, Zahra Patel, Chirag Mulder, Nicola |
author_sort | Kumuthini, Judit |
collection | PubMed |
description | OBJECTIVE: This project aimed to develop and propose a standardised reporting guideline for kidney disease research and clinical data reporting, in order to improve kidney disease data quality and integrity, and combat challenges associated with the management and challenges of ‘Big Data’. METHODS: A list of recommendations was proposed for the reporting guideline based on the systematic review and consolidation of previously published data collection and reporting standards, including PhenX measures and Minimal Information about a Proteomics Experiment (MIAPE). Thereafter, these recommendations were reviewed by domain-specialists using an online survey, developed in Research Electronic Data Capture (REDCap). Following interpretation and consolidation of the survey results, the recommendations were mapped to existing ontologies using Zooma, Ontology Lookup Service and the Bioportal search engine. Additionally, an associated eXtensible Markup Language schema was created for the REDCap implementation to increase user friendliness and adoption. RESULTS: The online survey was completed by 53 respondents; the majority of respondents were dual clinician-researchers (57%), based in Australia (35%), Africa (33%) and North America (22%). Data elements within the reporting standard were identified as participant-level, study-level and experiment-level information, further subdivided into essential or optional information. CONCLUSION: The reporting guideline is readily employable for kidney disease research projects, and also adaptable for clinical utility. The adoption of the reporting guideline in kidney disease research can increase data quality and the value for long-term preservation, ensuring researchers gain the maximum benefit from their collected and generated data. |
format | Online Article Text |
id | pubmed-6887010 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BMJ Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-68870102019-12-04 Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study Kumuthini, Judit van Woerden, Christiaan Mallett, Andrew Zass, Lyndon Chaouch, Melek Thompson, Michael Johnston, Katherine Mbiyavanga, Mamana Baichoo, Shakuntala Mungloo-Dilmohamud, Zahra Patel, Chirag Mulder, Nicola BMJ Open Health Informatics OBJECTIVE: This project aimed to develop and propose a standardised reporting guideline for kidney disease research and clinical data reporting, in order to improve kidney disease data quality and integrity, and combat challenges associated with the management and challenges of ‘Big Data’. METHODS: A list of recommendations was proposed for the reporting guideline based on the systematic review and consolidation of previously published data collection and reporting standards, including PhenX measures and Minimal Information about a Proteomics Experiment (MIAPE). Thereafter, these recommendations were reviewed by domain-specialists using an online survey, developed in Research Electronic Data Capture (REDCap). Following interpretation and consolidation of the survey results, the recommendations were mapped to existing ontologies using Zooma, Ontology Lookup Service and the Bioportal search engine. Additionally, an associated eXtensible Markup Language schema was created for the REDCap implementation to increase user friendliness and adoption. RESULTS: The online survey was completed by 53 respondents; the majority of respondents were dual clinician-researchers (57%), based in Australia (35%), Africa (33%) and North America (22%). Data elements within the reporting standard were identified as participant-level, study-level and experiment-level information, further subdivided into essential or optional information. CONCLUSION: The reporting guideline is readily employable for kidney disease research projects, and also adaptable for clinical utility. The adoption of the reporting guideline in kidney disease research can increase data quality and the value for long-term preservation, ensuring researchers gain the maximum benefit from their collected and generated data. BMJ Publishing Group 2019-11-26 /pmc/articles/PMC6887010/ /pubmed/31772086 http://dx.doi.org/10.1136/bmjopen-2019-029539 Text en © Author(s) (or their employer(s)) 2019. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ. This is an open access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited, appropriate credit is given, any changes made indicated, and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/. |
spellingShingle | Health Informatics Kumuthini, Judit van Woerden, Christiaan Mallett, Andrew Zass, Lyndon Chaouch, Melek Thompson, Michael Johnston, Katherine Mbiyavanga, Mamana Baichoo, Shakuntala Mungloo-Dilmohamud, Zahra Patel, Chirag Mulder, Nicola Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study |
title | Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study |
title_full | Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study |
title_fullStr | Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study |
title_full_unstemmed | Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study |
title_short | Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study |
title_sort | proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study |
topic | Health Informatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6887010/ https://www.ncbi.nlm.nih.gov/pubmed/31772086 http://dx.doi.org/10.1136/bmjopen-2019-029539 |
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