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Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study

OBJECTIVE: This project aimed to develop and propose a standardised reporting guideline for kidney disease research and clinical data reporting, in order to improve kidney disease data quality and integrity, and combat challenges associated with the management and challenges of ‘Big Data’. METHODS:...

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Autores principales: Kumuthini, Judit, van Woerden, Christiaan, Mallett, Andrew, Zass, Lyndon, Chaouch, Melek, Thompson, Michael, Johnston, Katherine, Mbiyavanga, Mamana, Baichoo, Shakuntala, Mungloo-Dilmohamud, Zahra, Patel, Chirag, Mulder, Nicola
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6887010/
https://www.ncbi.nlm.nih.gov/pubmed/31772086
http://dx.doi.org/10.1136/bmjopen-2019-029539
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author Kumuthini, Judit
van Woerden, Christiaan
Mallett, Andrew
Zass, Lyndon
Chaouch, Melek
Thompson, Michael
Johnston, Katherine
Mbiyavanga, Mamana
Baichoo, Shakuntala
Mungloo-Dilmohamud, Zahra
Patel, Chirag
Mulder, Nicola
author_facet Kumuthini, Judit
van Woerden, Christiaan
Mallett, Andrew
Zass, Lyndon
Chaouch, Melek
Thompson, Michael
Johnston, Katherine
Mbiyavanga, Mamana
Baichoo, Shakuntala
Mungloo-Dilmohamud, Zahra
Patel, Chirag
Mulder, Nicola
author_sort Kumuthini, Judit
collection PubMed
description OBJECTIVE: This project aimed to develop and propose a standardised reporting guideline for kidney disease research and clinical data reporting, in order to improve kidney disease data quality and integrity, and combat challenges associated with the management and challenges of ‘Big Data’. METHODS: A list of recommendations was proposed for the reporting guideline based on the systematic review and consolidation of previously published data collection and reporting standards, including PhenX measures and Minimal Information about a Proteomics Experiment (MIAPE). Thereafter, these recommendations were reviewed by domain-specialists using an online survey, developed in Research Electronic Data Capture (REDCap). Following interpretation and consolidation of the survey results, the recommendations were mapped to existing ontologies using Zooma, Ontology Lookup Service and the Bioportal search engine. Additionally, an associated eXtensible Markup Language schema was created for the REDCap implementation to increase user friendliness and adoption. RESULTS: The online survey was completed by 53 respondents; the majority of respondents were dual clinician-researchers (57%), based in Australia (35%), Africa (33%) and North America (22%). Data elements within the reporting standard were identified as participant-level, study-level and experiment-level information, further subdivided into essential or optional information. CONCLUSION: The reporting guideline is readily employable for kidney disease research projects, and also adaptable for clinical utility. The adoption of the reporting guideline in kidney disease research can increase data quality and the value for long-term preservation, ensuring researchers gain the maximum benefit from their collected and generated data.
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spelling pubmed-68870102019-12-04 Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study Kumuthini, Judit van Woerden, Christiaan Mallett, Andrew Zass, Lyndon Chaouch, Melek Thompson, Michael Johnston, Katherine Mbiyavanga, Mamana Baichoo, Shakuntala Mungloo-Dilmohamud, Zahra Patel, Chirag Mulder, Nicola BMJ Open Health Informatics OBJECTIVE: This project aimed to develop and propose a standardised reporting guideline for kidney disease research and clinical data reporting, in order to improve kidney disease data quality and integrity, and combat challenges associated with the management and challenges of ‘Big Data’. METHODS: A list of recommendations was proposed for the reporting guideline based on the systematic review and consolidation of previously published data collection and reporting standards, including PhenX measures and Minimal Information about a Proteomics Experiment (MIAPE). Thereafter, these recommendations were reviewed by domain-specialists using an online survey, developed in Research Electronic Data Capture (REDCap). Following interpretation and consolidation of the survey results, the recommendations were mapped to existing ontologies using Zooma, Ontology Lookup Service and the Bioportal search engine. Additionally, an associated eXtensible Markup Language schema was created for the REDCap implementation to increase user friendliness and adoption. RESULTS: The online survey was completed by 53 respondents; the majority of respondents were dual clinician-researchers (57%), based in Australia (35%), Africa (33%) and North America (22%). Data elements within the reporting standard were identified as participant-level, study-level and experiment-level information, further subdivided into essential or optional information. CONCLUSION: The reporting guideline is readily employable for kidney disease research projects, and also adaptable for clinical utility. The adoption of the reporting guideline in kidney disease research can increase data quality and the value for long-term preservation, ensuring researchers gain the maximum benefit from their collected and generated data. BMJ Publishing Group 2019-11-26 /pmc/articles/PMC6887010/ /pubmed/31772086 http://dx.doi.org/10.1136/bmjopen-2019-029539 Text en © Author(s) (or their employer(s)) 2019. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ. This is an open access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited, appropriate credit is given, any changes made indicated, and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/.
spellingShingle Health Informatics
Kumuthini, Judit
van Woerden, Christiaan
Mallett, Andrew
Zass, Lyndon
Chaouch, Melek
Thompson, Michael
Johnston, Katherine
Mbiyavanga, Mamana
Baichoo, Shakuntala
Mungloo-Dilmohamud, Zahra
Patel, Chirag
Mulder, Nicola
Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study
title Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study
title_full Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study
title_fullStr Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study
title_full_unstemmed Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study
title_short Proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study
title_sort proposed minimum information guideline for kidney disease—research and clinical data reporting: a cross-sectional study
topic Health Informatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6887010/
https://www.ncbi.nlm.nih.gov/pubmed/31772086
http://dx.doi.org/10.1136/bmjopen-2019-029539
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