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An integrated screening system for the selection of exemplary substrates for natural and engineered cytochrome P450s

Information about substrate and product selectivity is critical for understanding the function of cytochrome P450 monooxygenases. In addition, comprehensive understanding of changes in substrate selectivity of P450 upon amino acid mutation would enable the design and creation of engineered P450s wit...

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Autores principales: Kanoh, Naoki, Kawamata-Asano, Ayano, Suzuki, Kana, Takahashi, Yusuke, Miyazawa, Takeshi, Nakamura, Takemichi, Moriya, Takashi, Hirano, Hiroyuki, Osada, Hiroyuki, Iwabuchi, Yoshiharu, Takahashi, Shunji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6888865/
https://www.ncbi.nlm.nih.gov/pubmed/31792277
http://dx.doi.org/10.1038/s41598-019-54473-8
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author Kanoh, Naoki
Kawamata-Asano, Ayano
Suzuki, Kana
Takahashi, Yusuke
Miyazawa, Takeshi
Nakamura, Takemichi
Moriya, Takashi
Hirano, Hiroyuki
Osada, Hiroyuki
Iwabuchi, Yoshiharu
Takahashi, Shunji
author_facet Kanoh, Naoki
Kawamata-Asano, Ayano
Suzuki, Kana
Takahashi, Yusuke
Miyazawa, Takeshi
Nakamura, Takemichi
Moriya, Takashi
Hirano, Hiroyuki
Osada, Hiroyuki
Iwabuchi, Yoshiharu
Takahashi, Shunji
author_sort Kanoh, Naoki
collection PubMed
description Information about substrate and product selectivity is critical for understanding the function of cytochrome P450 monooxygenases. In addition, comprehensive understanding of changes in substrate selectivity of P450 upon amino acid mutation would enable the design and creation of engineered P450s with desired selectivities. Therefore, systematic methods for obtaining such information are required. Herein, we developed an integrated P450 substrate screening system for the selection of “exemplary” substrates for a P450 of interest. The established screening system accurately selected the known exemplary substrates and also identified previously unknown exemplary substrates for microbial-derived P450s from a library containing sp(3)-rich synthetic small molecules. Synthetically potent transformations were also found by analyzing the reactions and oxidation products. The screening system was applied to analyze the substrate selectivity of the P450 BM3 mutants F87A and F87A/A330W, which acquired an ability to hydroxylate non-natural substrate steroids regio- and stereoselectively by two amino acid mutations. The distinct transition of exemplary substrates due to each single amino acid mutation was revealed, demonstrating the utility of the established system.
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spelling pubmed-68888652019-12-10 An integrated screening system for the selection of exemplary substrates for natural and engineered cytochrome P450s Kanoh, Naoki Kawamata-Asano, Ayano Suzuki, Kana Takahashi, Yusuke Miyazawa, Takeshi Nakamura, Takemichi Moriya, Takashi Hirano, Hiroyuki Osada, Hiroyuki Iwabuchi, Yoshiharu Takahashi, Shunji Sci Rep Article Information about substrate and product selectivity is critical for understanding the function of cytochrome P450 monooxygenases. In addition, comprehensive understanding of changes in substrate selectivity of P450 upon amino acid mutation would enable the design and creation of engineered P450s with desired selectivities. Therefore, systematic methods for obtaining such information are required. Herein, we developed an integrated P450 substrate screening system for the selection of “exemplary” substrates for a P450 of interest. The established screening system accurately selected the known exemplary substrates and also identified previously unknown exemplary substrates for microbial-derived P450s from a library containing sp(3)-rich synthetic small molecules. Synthetically potent transformations were also found by analyzing the reactions and oxidation products. The screening system was applied to analyze the substrate selectivity of the P450 BM3 mutants F87A and F87A/A330W, which acquired an ability to hydroxylate non-natural substrate steroids regio- and stereoselectively by two amino acid mutations. The distinct transition of exemplary substrates due to each single amino acid mutation was revealed, demonstrating the utility of the established system. Nature Publishing Group UK 2019-12-02 /pmc/articles/PMC6888865/ /pubmed/31792277 http://dx.doi.org/10.1038/s41598-019-54473-8 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kanoh, Naoki
Kawamata-Asano, Ayano
Suzuki, Kana
Takahashi, Yusuke
Miyazawa, Takeshi
Nakamura, Takemichi
Moriya, Takashi
Hirano, Hiroyuki
Osada, Hiroyuki
Iwabuchi, Yoshiharu
Takahashi, Shunji
An integrated screening system for the selection of exemplary substrates for natural and engineered cytochrome P450s
title An integrated screening system for the selection of exemplary substrates for natural and engineered cytochrome P450s
title_full An integrated screening system for the selection of exemplary substrates for natural and engineered cytochrome P450s
title_fullStr An integrated screening system for the selection of exemplary substrates for natural and engineered cytochrome P450s
title_full_unstemmed An integrated screening system for the selection of exemplary substrates for natural and engineered cytochrome P450s
title_short An integrated screening system for the selection of exemplary substrates for natural and engineered cytochrome P450s
title_sort integrated screening system for the selection of exemplary substrates for natural and engineered cytochrome p450s
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6888865/
https://www.ncbi.nlm.nih.gov/pubmed/31792277
http://dx.doi.org/10.1038/s41598-019-54473-8
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