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Shake-it-off: a simple ultrasonic cryo-EM specimen-preparation device
Although microscopes and image-analysis software for electron cryomicroscopy (cryo-EM) have improved dramatically in recent years, specimen-preparation methods have lagged behind. Most strategies still rely on blotting microscope grids with paper to produce a thin film of solution suitable for vitri...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6889916/ https://www.ncbi.nlm.nih.gov/pubmed/31793900 http://dx.doi.org/10.1107/S2059798319014372 |
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author | Rubinstein, John L. Guo, Hui Ripstein, Zev A. Haydaroglu, Ali Au, Aaron Yip, Christopher M. Di Trani, Justin M. Benlekbir, Samir Kwok, Timothy |
author_facet | Rubinstein, John L. Guo, Hui Ripstein, Zev A. Haydaroglu, Ali Au, Aaron Yip, Christopher M. Di Trani, Justin M. Benlekbir, Samir Kwok, Timothy |
author_sort | Rubinstein, John L. |
collection | PubMed |
description | Although microscopes and image-analysis software for electron cryomicroscopy (cryo-EM) have improved dramatically in recent years, specimen-preparation methods have lagged behind. Most strategies still rely on blotting microscope grids with paper to produce a thin film of solution suitable for vitrification. This approach loses more than 99.9% of the applied sample and requires several seconds, leading to problematic air–water interface interactions for macromolecules in the resulting thin film of solution and complicating time-resolved studies. Recently developed self-wicking EM grids allow the use of small volumes of sample, with nanowires on the grid bars removing excess solution to produce a thin film within tens of milliseconds from sample application to freezing. Here, a simple cryo-EM specimen-preparation device that uses components from an ultrasonic humidifier to transfer protein solution onto a self-wicking EM grid is presented. The device is controlled by a Raspberry Pi single-board computer and all components are either widely available or can be manufactured by online services, allowing the device to be constructed in laboratories that specialize in cryo-EM rather than instrument design. The simple open-source design permits the straightforward customization of the instrument for specialized experiments. |
format | Online Article Text |
id | pubmed-6889916 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-68899162019-12-16 Shake-it-off: a simple ultrasonic cryo-EM specimen-preparation device Rubinstein, John L. Guo, Hui Ripstein, Zev A. Haydaroglu, Ali Au, Aaron Yip, Christopher M. Di Trani, Justin M. Benlekbir, Samir Kwok, Timothy Acta Crystallogr D Struct Biol Ccp-EM Although microscopes and image-analysis software for electron cryomicroscopy (cryo-EM) have improved dramatically in recent years, specimen-preparation methods have lagged behind. Most strategies still rely on blotting microscope grids with paper to produce a thin film of solution suitable for vitrification. This approach loses more than 99.9% of the applied sample and requires several seconds, leading to problematic air–water interface interactions for macromolecules in the resulting thin film of solution and complicating time-resolved studies. Recently developed self-wicking EM grids allow the use of small volumes of sample, with nanowires on the grid bars removing excess solution to produce a thin film within tens of milliseconds from sample application to freezing. Here, a simple cryo-EM specimen-preparation device that uses components from an ultrasonic humidifier to transfer protein solution onto a self-wicking EM grid is presented. The device is controlled by a Raspberry Pi single-board computer and all components are either widely available or can be manufactured by online services, allowing the device to be constructed in laboratories that specialize in cryo-EM rather than instrument design. The simple open-source design permits the straightforward customization of the instrument for specialized experiments. International Union of Crystallography 2019-11-22 /pmc/articles/PMC6889916/ /pubmed/31793900 http://dx.doi.org/10.1107/S2059798319014372 Text en © Rubinstein et al. 2019 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Ccp-EM Rubinstein, John L. Guo, Hui Ripstein, Zev A. Haydaroglu, Ali Au, Aaron Yip, Christopher M. Di Trani, Justin M. Benlekbir, Samir Kwok, Timothy Shake-it-off: a simple ultrasonic cryo-EM specimen-preparation device |
title | Shake-it-off: a simple ultrasonic cryo-EM specimen-preparation device |
title_full | Shake-it-off: a simple ultrasonic cryo-EM specimen-preparation device |
title_fullStr | Shake-it-off: a simple ultrasonic cryo-EM specimen-preparation device |
title_full_unstemmed | Shake-it-off: a simple ultrasonic cryo-EM specimen-preparation device |
title_short | Shake-it-off: a simple ultrasonic cryo-EM specimen-preparation device |
title_sort | shake-it-off: a simple ultrasonic cryo-em specimen-preparation device |
topic | Ccp-EM |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6889916/ https://www.ncbi.nlm.nih.gov/pubmed/31793900 http://dx.doi.org/10.1107/S2059798319014372 |
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