Cargando…
Reporting of race in genome and exome sequencing studies of cancer: a scoping review of the literature
PURPOSE: Minorities are often underrepresented in clinical cancer research yet the frequency of reporting of race in genomic sequencing studies of cancer is unknown. This scoping review determines the rate at which race is reported as a demographic variable, the factors associated with reporting of...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group US
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6891161/ https://www.ncbi.nlm.nih.gov/pubmed/31160752 http://dx.doi.org/10.1038/s41436-019-0558-2 |
_version_ | 1783475757880705024 |
---|---|
author | Nugent, Adrienne Conatser, Kelly R. Turner, Llaran L. Nugent, James T. Sarino, Esther May B. Ricks-Santi, Luisel J. |
author_facet | Nugent, Adrienne Conatser, Kelly R. Turner, Llaran L. Nugent, James T. Sarino, Esther May B. Ricks-Santi, Luisel J. |
author_sort | Nugent, Adrienne |
collection | PubMed |
description | PURPOSE: Minorities are often underrepresented in clinical cancer research yet the frequency of reporting of race in genomic sequencing studies of cancer is unknown. This scoping review determines the rate at which race is reported as a demographic variable, the factors associated with reporting of race, and the participation rates of minority populations. METHODS: PubMed was systematically searched from 1 January 2010 through 15 November 2018 and 11,014 studies were assessed for eligibility. Publications reporting genome or exome sequencing data for patients with one of the ten most common cancers in the United States were included. RESULTS: A total of 231 publications containing sequencing data from 15,721 unique patients met inclusion criteria. Race was reported in 37% of studies compared with 84% of studies reporting age and 85% reporting gender. Reporting of race was associated with cohort size, sequencing method, familial cancer, cancers with disparities, and reporting of age and gender. Minority populations were significantly underpowered to detect recurrent pathogenic variants in most cancers. CONCLUSION: Race is underreported as a demographic variable in genomic sequencing studies of cancer. Substantially increased efforts are needed to sequence patients from underrepresented populations to reduce health disparities in patients of non-European ancestry. |
format | Online Article Text |
id | pubmed-6891161 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group US |
record_format | MEDLINE/PubMed |
spelling | pubmed-68911612019-12-06 Reporting of race in genome and exome sequencing studies of cancer: a scoping review of the literature Nugent, Adrienne Conatser, Kelly R. Turner, Llaran L. Nugent, James T. Sarino, Esther May B. Ricks-Santi, Luisel J. Genet Med Systematic Review PURPOSE: Minorities are often underrepresented in clinical cancer research yet the frequency of reporting of race in genomic sequencing studies of cancer is unknown. This scoping review determines the rate at which race is reported as a demographic variable, the factors associated with reporting of race, and the participation rates of minority populations. METHODS: PubMed was systematically searched from 1 January 2010 through 15 November 2018 and 11,014 studies were assessed for eligibility. Publications reporting genome or exome sequencing data for patients with one of the ten most common cancers in the United States were included. RESULTS: A total of 231 publications containing sequencing data from 15,721 unique patients met inclusion criteria. Race was reported in 37% of studies compared with 84% of studies reporting age and 85% reporting gender. Reporting of race was associated with cohort size, sequencing method, familial cancer, cancers with disparities, and reporting of age and gender. Minority populations were significantly underpowered to detect recurrent pathogenic variants in most cancers. CONCLUSION: Race is underreported as a demographic variable in genomic sequencing studies of cancer. Substantially increased efforts are needed to sequence patients from underrepresented populations to reduce health disparities in patients of non-European ancestry. Nature Publishing Group US 2019-06-04 2019 /pmc/articles/PMC6891161/ /pubmed/31160752 http://dx.doi.org/10.1038/s41436-019-0558-2 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Systematic Review Nugent, Adrienne Conatser, Kelly R. Turner, Llaran L. Nugent, James T. Sarino, Esther May B. Ricks-Santi, Luisel J. Reporting of race in genome and exome sequencing studies of cancer: a scoping review of the literature |
title | Reporting of race in genome and exome sequencing studies of cancer: a scoping review of the literature |
title_full | Reporting of race in genome and exome sequencing studies of cancer: a scoping review of the literature |
title_fullStr | Reporting of race in genome and exome sequencing studies of cancer: a scoping review of the literature |
title_full_unstemmed | Reporting of race in genome and exome sequencing studies of cancer: a scoping review of the literature |
title_short | Reporting of race in genome and exome sequencing studies of cancer: a scoping review of the literature |
title_sort | reporting of race in genome and exome sequencing studies of cancer: a scoping review of the literature |
topic | Systematic Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6891161/ https://www.ncbi.nlm.nih.gov/pubmed/31160752 http://dx.doi.org/10.1038/s41436-019-0558-2 |
work_keys_str_mv | AT nugentadrienne reportingofraceingenomeandexomesequencingstudiesofcancerascopingreviewoftheliterature AT conatserkellyr reportingofraceingenomeandexomesequencingstudiesofcancerascopingreviewoftheliterature AT turnerllaranl reportingofraceingenomeandexomesequencingstudiesofcancerascopingreviewoftheliterature AT nugentjamest reportingofraceingenomeandexomesequencingstudiesofcancerascopingreviewoftheliterature AT sarinoesthermayb reportingofraceingenomeandexomesequencingstudiesofcancerascopingreviewoftheliterature AT rickssantiluiselj reportingofraceingenomeandexomesequencingstudiesofcancerascopingreviewoftheliterature |