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Dashing: fast and accurate genomic distances with HyperLogLog

Dashing is a fast and accurate software tool for estimating similarities of genomes or sequencing datasets. It uses the HyperLogLog sketch together with cardinality estimation methods that are specialized for set unions and intersections. Dashing summarizes genomes more rapidly than previous MinHash...

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Detalles Bibliográficos
Autores principales: Baker, Daniel N., Langmead, Ben
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6892282/
https://www.ncbi.nlm.nih.gov/pubmed/31801633
http://dx.doi.org/10.1186/s13059-019-1875-0

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