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Feature identification in time-indexed model output
We present a method for identifying features (time periods of interest) in data sets consisting of time-indexed model output. The method is used as a diagnostic to quickly focus the attention on a subset of the data before further analysis methods are applied. Mathematically, the infinity norm error...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6892550/ https://www.ncbi.nlm.nih.gov/pubmed/31800624 http://dx.doi.org/10.1371/journal.pone.0225439 |
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author | Shaw, Justin Stastna, Marek |
author_facet | Shaw, Justin Stastna, Marek |
author_sort | Shaw, Justin |
collection | PubMed |
description | We present a method for identifying features (time periods of interest) in data sets consisting of time-indexed model output. The method is used as a diagnostic to quickly focus the attention on a subset of the data before further analysis methods are applied. Mathematically, the infinity norm errors of empirical orthogonal function (EOF) reconstructions are calculated for each time output. The result is an EOF reconstruction error map which clearly identifies features as changes in the error structure over time. The ubiquity of EOF-type methods in a wide range of disciplines reduces barriers to comprehension and implementation of the method. We apply the error map method to three different Computational Fluid Dynamics (CFD) data sets as examples: the development of a spontaneous instability in a large amplitude internal solitary wave, an internal wave interacting with a density profile change, and the collision of two waves of different vertical mode. In all cases the EOF error map method identifies relevant features which are worthy of further study. |
format | Online Article Text |
id | pubmed-6892550 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-68925502019-12-14 Feature identification in time-indexed model output Shaw, Justin Stastna, Marek PLoS One Research Article We present a method for identifying features (time periods of interest) in data sets consisting of time-indexed model output. The method is used as a diagnostic to quickly focus the attention on a subset of the data before further analysis methods are applied. Mathematically, the infinity norm errors of empirical orthogonal function (EOF) reconstructions are calculated for each time output. The result is an EOF reconstruction error map which clearly identifies features as changes in the error structure over time. The ubiquity of EOF-type methods in a wide range of disciplines reduces barriers to comprehension and implementation of the method. We apply the error map method to three different Computational Fluid Dynamics (CFD) data sets as examples: the development of a spontaneous instability in a large amplitude internal solitary wave, an internal wave interacting with a density profile change, and the collision of two waves of different vertical mode. In all cases the EOF error map method identifies relevant features which are worthy of further study. Public Library of Science 2019-12-04 /pmc/articles/PMC6892550/ /pubmed/31800624 http://dx.doi.org/10.1371/journal.pone.0225439 Text en © 2019 Shaw, Stastna http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Shaw, Justin Stastna, Marek Feature identification in time-indexed model output |
title | Feature identification in time-indexed model output |
title_full | Feature identification in time-indexed model output |
title_fullStr | Feature identification in time-indexed model output |
title_full_unstemmed | Feature identification in time-indexed model output |
title_short | Feature identification in time-indexed model output |
title_sort | feature identification in time-indexed model output |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6892550/ https://www.ncbi.nlm.nih.gov/pubmed/31800624 http://dx.doi.org/10.1371/journal.pone.0225439 |
work_keys_str_mv | AT shawjustin featureidentificationintimeindexedmodeloutput AT stastnamarek featureidentificationintimeindexedmodeloutput |