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EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study
BACKGROUND: Glioma is one of the most common type of primary central nervous system tumors. EGFR mutation, a common alteration occurs in various tumors, is not brought to the forefront in understanding and treating glioma at present. METHODS: In the present study, we demonstrated an immune infiltrat...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6894128/ https://www.ncbi.nlm.nih.gov/pubmed/31801484 http://dx.doi.org/10.1186/s12885-019-6384-8 |
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author | Hao, Zhaonian Guo, Dongsheng |
author_facet | Hao, Zhaonian Guo, Dongsheng |
author_sort | Hao, Zhaonian |
collection | PubMed |
description | BACKGROUND: Glioma is one of the most common type of primary central nervous system tumors. EGFR mutation, a common alteration occurs in various tumors, is not brought to the forefront in understanding and treating glioma at present. METHODS: In the present study, we demonstrated an immune infiltration related pattern of EGFR mutation in lower-grade glioma. In silico analyses were performed to investigate EGFR mutation and its biological effects and clinical values. GO and GSEA process were used as enrichment analysis. Infiltration levels of specific types of immune cells were estimated at TIMER database. Clinical data of patients were obtained from TCGA and were employed for survival analyses. RESULTS: Here we revealed that EGFR mutation leads to an up-regulation of immune response related pathways and dismal prognosis in lower-grade glioma. Infiltration of CD4+ T cells, neutrophils, macrophages, and dendritic cells were significantly increased in EGFR-mutant cases. Infiltration of specific types of immune cells were correlated with shorter survival time. PD-L1 was elevated in EGFR-mutant cases and correlated with infiltration level of CD4+ T cells, neutrophils and dendritic cells. CONCLUSION: EGFR mutation indicates increasing infiltration of specific types of immune cells and poor prognosis in lower-grade glioma. Alteration of immune microenvironment since the EGFR mutation might influence the survival of glioma. We also provided a novel evidence and indicator of PD-1 inhibitor application in glioma. |
format | Online Article Text |
id | pubmed-6894128 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-68941282019-12-11 EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study Hao, Zhaonian Guo, Dongsheng BMC Cancer Research Article BACKGROUND: Glioma is one of the most common type of primary central nervous system tumors. EGFR mutation, a common alteration occurs in various tumors, is not brought to the forefront in understanding and treating glioma at present. METHODS: In the present study, we demonstrated an immune infiltration related pattern of EGFR mutation in lower-grade glioma. In silico analyses were performed to investigate EGFR mutation and its biological effects and clinical values. GO and GSEA process were used as enrichment analysis. Infiltration levels of specific types of immune cells were estimated at TIMER database. Clinical data of patients were obtained from TCGA and were employed for survival analyses. RESULTS: Here we revealed that EGFR mutation leads to an up-regulation of immune response related pathways and dismal prognosis in lower-grade glioma. Infiltration of CD4+ T cells, neutrophils, macrophages, and dendritic cells were significantly increased in EGFR-mutant cases. Infiltration of specific types of immune cells were correlated with shorter survival time. PD-L1 was elevated in EGFR-mutant cases and correlated with infiltration level of CD4+ T cells, neutrophils and dendritic cells. CONCLUSION: EGFR mutation indicates increasing infiltration of specific types of immune cells and poor prognosis in lower-grade glioma. Alteration of immune microenvironment since the EGFR mutation might influence the survival of glioma. We also provided a novel evidence and indicator of PD-1 inhibitor application in glioma. BioMed Central 2019-12-04 /pmc/articles/PMC6894128/ /pubmed/31801484 http://dx.doi.org/10.1186/s12885-019-6384-8 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Hao, Zhaonian Guo, Dongsheng EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study |
title | EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study |
title_full | EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study |
title_fullStr | EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study |
title_full_unstemmed | EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study |
title_short | EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study |
title_sort | egfr mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6894128/ https://www.ncbi.nlm.nih.gov/pubmed/31801484 http://dx.doi.org/10.1186/s12885-019-6384-8 |
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