Cargando…

EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study

BACKGROUND: Glioma is one of the most common type of primary central nervous system tumors. EGFR mutation, a common alteration occurs in various tumors, is not brought to the forefront in understanding and treating glioma at present. METHODS: In the present study, we demonstrated an immune infiltrat...

Descripción completa

Detalles Bibliográficos
Autores principales: Hao, Zhaonian, Guo, Dongsheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6894128/
https://www.ncbi.nlm.nih.gov/pubmed/31801484
http://dx.doi.org/10.1186/s12885-019-6384-8
_version_ 1783476329227747328
author Hao, Zhaonian
Guo, Dongsheng
author_facet Hao, Zhaonian
Guo, Dongsheng
author_sort Hao, Zhaonian
collection PubMed
description BACKGROUND: Glioma is one of the most common type of primary central nervous system tumors. EGFR mutation, a common alteration occurs in various tumors, is not brought to the forefront in understanding and treating glioma at present. METHODS: In the present study, we demonstrated an immune infiltration related pattern of EGFR mutation in lower-grade glioma. In silico analyses were performed to investigate EGFR mutation and its biological effects and clinical values. GO and GSEA process were used as enrichment analysis. Infiltration levels of specific types of immune cells were estimated at TIMER database. Clinical data of patients were obtained from TCGA and were employed for survival analyses. RESULTS: Here we revealed that EGFR mutation leads to an up-regulation of immune response related pathways and dismal prognosis in lower-grade glioma. Infiltration of CD4+ T cells, neutrophils, macrophages, and dendritic cells were significantly increased in EGFR-mutant cases. Infiltration of specific types of immune cells were correlated with shorter survival time. PD-L1 was elevated in EGFR-mutant cases and correlated with infiltration level of CD4+ T cells, neutrophils and dendritic cells. CONCLUSION: EGFR mutation indicates increasing infiltration of specific types of immune cells and poor prognosis in lower-grade glioma. Alteration of immune microenvironment since the EGFR mutation might influence the survival of glioma. We also provided a novel evidence and indicator of PD-1 inhibitor application in glioma.
format Online
Article
Text
id pubmed-6894128
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-68941282019-12-11 EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study Hao, Zhaonian Guo, Dongsheng BMC Cancer Research Article BACKGROUND: Glioma is one of the most common type of primary central nervous system tumors. EGFR mutation, a common alteration occurs in various tumors, is not brought to the forefront in understanding and treating glioma at present. METHODS: In the present study, we demonstrated an immune infiltration related pattern of EGFR mutation in lower-grade glioma. In silico analyses were performed to investigate EGFR mutation and its biological effects and clinical values. GO and GSEA process were used as enrichment analysis. Infiltration levels of specific types of immune cells were estimated at TIMER database. Clinical data of patients were obtained from TCGA and were employed for survival analyses. RESULTS: Here we revealed that EGFR mutation leads to an up-regulation of immune response related pathways and dismal prognosis in lower-grade glioma. Infiltration of CD4+ T cells, neutrophils, macrophages, and dendritic cells were significantly increased in EGFR-mutant cases. Infiltration of specific types of immune cells were correlated with shorter survival time. PD-L1 was elevated in EGFR-mutant cases and correlated with infiltration level of CD4+ T cells, neutrophils and dendritic cells. CONCLUSION: EGFR mutation indicates increasing infiltration of specific types of immune cells and poor prognosis in lower-grade glioma. Alteration of immune microenvironment since the EGFR mutation might influence the survival of glioma. We also provided a novel evidence and indicator of PD-1 inhibitor application in glioma. BioMed Central 2019-12-04 /pmc/articles/PMC6894128/ /pubmed/31801484 http://dx.doi.org/10.1186/s12885-019-6384-8 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Hao, Zhaonian
Guo, Dongsheng
EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study
title EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study
title_full EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study
title_fullStr EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study
title_full_unstemmed EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study
title_short EGFR mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study
title_sort egfr mutation: novel prognostic factor associated with immune infiltration in lower-grade glioma; an exploratory study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6894128/
https://www.ncbi.nlm.nih.gov/pubmed/31801484
http://dx.doi.org/10.1186/s12885-019-6384-8
work_keys_str_mv AT haozhaonian egfrmutationnovelprognosticfactorassociatedwithimmuneinfiltrationinlowergradegliomaanexploratorystudy
AT guodongsheng egfrmutationnovelprognosticfactorassociatedwithimmuneinfiltrationinlowergradegliomaanexploratorystudy