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Molecular cytogenetics of valuable Arctic and sub-Arctic pasture grass species from the Aveneae/Poeae tribe complex (Poaceae)

ABSTRACT: BACKGROUND: Grasslands in the Arctic tundra undergo irreversible degradation due to climatic changes and also over-exploitation and depletion of scarce resources. Comprehensive investigations of cytogenomic structures of valuable Arctic and sub-Arctic grassland species is essential for cla...

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Autores principales: Amosova, Alexandra V., Zoshchuk, Svyatoslav A., Rodionov, Alexander V., Ghukasyan, Lilit, Samatadze, Tatiana E., Punina, Elizaveta O., Loskutov, Igor G., Yurkevich, Olga Yu., Muravenko, Olga V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6894191/
https://www.ncbi.nlm.nih.gov/pubmed/31801460
http://dx.doi.org/10.1186/s12863-019-0792-2
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author Amosova, Alexandra V.
Zoshchuk, Svyatoslav A.
Rodionov, Alexander V.
Ghukasyan, Lilit
Samatadze, Tatiana E.
Punina, Elizaveta O.
Loskutov, Igor G.
Yurkevich, Olga Yu.
Muravenko, Olga V.
author_facet Amosova, Alexandra V.
Zoshchuk, Svyatoslav A.
Rodionov, Alexander V.
Ghukasyan, Lilit
Samatadze, Tatiana E.
Punina, Elizaveta O.
Loskutov, Igor G.
Yurkevich, Olga Yu.
Muravenko, Olga V.
author_sort Amosova, Alexandra V.
collection PubMed
description ABSTRACT: BACKGROUND: Grasslands in the Arctic tundra undergo irreversible degradation due to climatic changes and also over-exploitation and depletion of scarce resources. Comprehensive investigations of cytogenomic structures of valuable Arctic and sub-Arctic grassland species is essential for clarifying their genetic peculiarities and phylogenetic relationships, and also successful developing new forage grass cultivars with high levels of adaptation, stable productivity and longevity. We performed molecular cytogenetic characterization of insufficiently studied pasture grass species (Poaceae) from related genera representing two neighboring clades: 1) Deschampsia and Holcus; 2) Alopecurus, Arctagrostis and Beckmannia, which are the primary fodder resources in the Arctic tundra. RESULTS: We constructed the integrated schematic maps of distribution of these species in the northern, central and eastern parts of Eurasia based on the currently available data as only scattered data on their occurrence is currently available. The species karyotypes were examined with the use of DAPI-banding, multicolour FISH with 35S rDNA, 5S rDNA and the (GTT)(9) microsatellite motif and also sequential rapid multocolour GISH with genomic DNAs of Deschampsia sukatschewii, Deschampsia flexuosa and Holcus lanatus belonging to one of the studied clades. Cytogenomic structures of the species were specified; peculiarities and common features of their genomes were revealed. Different chromosomal rearrangements were detected in Beckmannia syzigachne, Deschampsia cespitosa and D. flexuosa; B chromosomes with distinct DAPI-bands were observed in karyotypes of D. cespitosa and H. lanatus. CONCLUSIONS: The peculiarities of distribution patterns of the examined chromosomal markers and also presence of common homologous DNA repeats in karyotypes of the studies species allowed us to verify their relationships. The obtained unique data on distribution areas and cytogenomic structures of the valuable Arctic and sub-Arctic pasture species are important for further genetic and biotechnological studies and also plant breeding progress.
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spelling pubmed-68941912019-12-11 Molecular cytogenetics of valuable Arctic and sub-Arctic pasture grass species from the Aveneae/Poeae tribe complex (Poaceae) Amosova, Alexandra V. Zoshchuk, Svyatoslav A. Rodionov, Alexander V. Ghukasyan, Lilit Samatadze, Tatiana E. Punina, Elizaveta O. Loskutov, Igor G. Yurkevich, Olga Yu. Muravenko, Olga V. BMC Genet Research Article ABSTRACT: BACKGROUND: Grasslands in the Arctic tundra undergo irreversible degradation due to climatic changes and also over-exploitation and depletion of scarce resources. Comprehensive investigations of cytogenomic structures of valuable Arctic and sub-Arctic grassland species is essential for clarifying their genetic peculiarities and phylogenetic relationships, and also successful developing new forage grass cultivars with high levels of adaptation, stable productivity and longevity. We performed molecular cytogenetic characterization of insufficiently studied pasture grass species (Poaceae) from related genera representing two neighboring clades: 1) Deschampsia and Holcus; 2) Alopecurus, Arctagrostis and Beckmannia, which are the primary fodder resources in the Arctic tundra. RESULTS: We constructed the integrated schematic maps of distribution of these species in the northern, central and eastern parts of Eurasia based on the currently available data as only scattered data on their occurrence is currently available. The species karyotypes were examined with the use of DAPI-banding, multicolour FISH with 35S rDNA, 5S rDNA and the (GTT)(9) microsatellite motif and also sequential rapid multocolour GISH with genomic DNAs of Deschampsia sukatschewii, Deschampsia flexuosa and Holcus lanatus belonging to one of the studied clades. Cytogenomic structures of the species were specified; peculiarities and common features of their genomes were revealed. Different chromosomal rearrangements were detected in Beckmannia syzigachne, Deschampsia cespitosa and D. flexuosa; B chromosomes with distinct DAPI-bands were observed in karyotypes of D. cespitosa and H. lanatus. CONCLUSIONS: The peculiarities of distribution patterns of the examined chromosomal markers and also presence of common homologous DNA repeats in karyotypes of the studies species allowed us to verify their relationships. The obtained unique data on distribution areas and cytogenomic structures of the valuable Arctic and sub-Arctic pasture species are important for further genetic and biotechnological studies and also plant breeding progress. BioMed Central 2019-12-04 /pmc/articles/PMC6894191/ /pubmed/31801460 http://dx.doi.org/10.1186/s12863-019-0792-2 Text en © The Author(s). 2019 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Amosova, Alexandra V.
Zoshchuk, Svyatoslav A.
Rodionov, Alexander V.
Ghukasyan, Lilit
Samatadze, Tatiana E.
Punina, Elizaveta O.
Loskutov, Igor G.
Yurkevich, Olga Yu.
Muravenko, Olga V.
Molecular cytogenetics of valuable Arctic and sub-Arctic pasture grass species from the Aveneae/Poeae tribe complex (Poaceae)
title Molecular cytogenetics of valuable Arctic and sub-Arctic pasture grass species from the Aveneae/Poeae tribe complex (Poaceae)
title_full Molecular cytogenetics of valuable Arctic and sub-Arctic pasture grass species from the Aveneae/Poeae tribe complex (Poaceae)
title_fullStr Molecular cytogenetics of valuable Arctic and sub-Arctic pasture grass species from the Aveneae/Poeae tribe complex (Poaceae)
title_full_unstemmed Molecular cytogenetics of valuable Arctic and sub-Arctic pasture grass species from the Aveneae/Poeae tribe complex (Poaceae)
title_short Molecular cytogenetics of valuable Arctic and sub-Arctic pasture grass species from the Aveneae/Poeae tribe complex (Poaceae)
title_sort molecular cytogenetics of valuable arctic and sub-arctic pasture grass species from the aveneae/poeae tribe complex (poaceae)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6894191/
https://www.ncbi.nlm.nih.gov/pubmed/31801460
http://dx.doi.org/10.1186/s12863-019-0792-2
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