Cargando…

Comparative dataset of experimental and computational attributes of UV/vis absorption spectra

The ability to auto-generate databases of optical properties holds great prospects in data-driven materials discovery for optoelectronic applications. We present a cognate set of experimental and computational data that describes key features of optical absorption spectra. This includes an auto-gene...

Descripción completa

Detalles Bibliográficos
Autores principales: Beard, Edward J., Sivaraman, Ganesh, Vázquez-Mayagoitia, Álvaro, Vishwanath, Venkatram, Cole, Jacqueline M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6895184/
https://www.ncbi.nlm.nih.gov/pubmed/31804487
http://dx.doi.org/10.1038/s41597-019-0306-0
_version_ 1783476541816045568
author Beard, Edward J.
Sivaraman, Ganesh
Vázquez-Mayagoitia, Álvaro
Vishwanath, Venkatram
Cole, Jacqueline M.
author_facet Beard, Edward J.
Sivaraman, Ganesh
Vázquez-Mayagoitia, Álvaro
Vishwanath, Venkatram
Cole, Jacqueline M.
author_sort Beard, Edward J.
collection PubMed
description The ability to auto-generate databases of optical properties holds great prospects in data-driven materials discovery for optoelectronic applications. We present a cognate set of experimental and computational data that describes key features of optical absorption spectra. This includes an auto-generated database of 18,309 records of experimentally determined UV/vis absorption maxima, λ(max), and associated extinction coefficients, ϵ, where present. This database was produced using the text-mining toolkit, ChemDataExtractor, on 402,034 scientific documents. High-throughput electronic-structure calculations using fast (simplified Tamm-Dancoff approach) and traditional (time-dependent) density functional theory were executed to predict λ(max) and oscillation strengths, f (related to ϵ) for a subset of validated compounds. Paired quantities of these computational and experimental data show strong correlations in λ(max), f and ϵ, laying the path for reliable in silico calculations of additional optical properties. The total dataset of 8,488 unique compounds and a subset of 5,380 compounds with experimental and computational data, are available in MongoDB, CSV and JSON formats. These can be queried using Python, R, Java, and MATLAB, for data-driven optoelectronic materials discovery.
format Online
Article
Text
id pubmed-6895184
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-68951842019-12-13 Comparative dataset of experimental and computational attributes of UV/vis absorption spectra Beard, Edward J. Sivaraman, Ganesh Vázquez-Mayagoitia, Álvaro Vishwanath, Venkatram Cole, Jacqueline M. Sci Data Data Descriptor The ability to auto-generate databases of optical properties holds great prospects in data-driven materials discovery for optoelectronic applications. We present a cognate set of experimental and computational data that describes key features of optical absorption spectra. This includes an auto-generated database of 18,309 records of experimentally determined UV/vis absorption maxima, λ(max), and associated extinction coefficients, ϵ, where present. This database was produced using the text-mining toolkit, ChemDataExtractor, on 402,034 scientific documents. High-throughput electronic-structure calculations using fast (simplified Tamm-Dancoff approach) and traditional (time-dependent) density functional theory were executed to predict λ(max) and oscillation strengths, f (related to ϵ) for a subset of validated compounds. Paired quantities of these computational and experimental data show strong correlations in λ(max), f and ϵ, laying the path for reliable in silico calculations of additional optical properties. The total dataset of 8,488 unique compounds and a subset of 5,380 compounds with experimental and computational data, are available in MongoDB, CSV and JSON formats. These can be queried using Python, R, Java, and MATLAB, for data-driven optoelectronic materials discovery. Nature Publishing Group UK 2019-12-05 /pmc/articles/PMC6895184/ /pubmed/31804487 http://dx.doi.org/10.1038/s41597-019-0306-0 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article.
spellingShingle Data Descriptor
Beard, Edward J.
Sivaraman, Ganesh
Vázquez-Mayagoitia, Álvaro
Vishwanath, Venkatram
Cole, Jacqueline M.
Comparative dataset of experimental and computational attributes of UV/vis absorption spectra
title Comparative dataset of experimental and computational attributes of UV/vis absorption spectra
title_full Comparative dataset of experimental and computational attributes of UV/vis absorption spectra
title_fullStr Comparative dataset of experimental and computational attributes of UV/vis absorption spectra
title_full_unstemmed Comparative dataset of experimental and computational attributes of UV/vis absorption spectra
title_short Comparative dataset of experimental and computational attributes of UV/vis absorption spectra
title_sort comparative dataset of experimental and computational attributes of uv/vis absorption spectra
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6895184/
https://www.ncbi.nlm.nih.gov/pubmed/31804487
http://dx.doi.org/10.1038/s41597-019-0306-0
work_keys_str_mv AT beardedwardj comparativedatasetofexperimentalandcomputationalattributesofuvvisabsorptionspectra
AT sivaramanganesh comparativedatasetofexperimentalandcomputationalattributesofuvvisabsorptionspectra
AT vazquezmayagoitiaalvaro comparativedatasetofexperimentalandcomputationalattributesofuvvisabsorptionspectra
AT vishwanathvenkatram comparativedatasetofexperimentalandcomputationalattributesofuvvisabsorptionspectra
AT colejacquelinem comparativedatasetofexperimentalandcomputationalattributesofuvvisabsorptionspectra