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Comparative dataset of experimental and computational attributes of UV/vis absorption spectra
The ability to auto-generate databases of optical properties holds great prospects in data-driven materials discovery for optoelectronic applications. We present a cognate set of experimental and computational data that describes key features of optical absorption spectra. This includes an auto-gene...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6895184/ https://www.ncbi.nlm.nih.gov/pubmed/31804487 http://dx.doi.org/10.1038/s41597-019-0306-0 |
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author | Beard, Edward J. Sivaraman, Ganesh Vázquez-Mayagoitia, Álvaro Vishwanath, Venkatram Cole, Jacqueline M. |
author_facet | Beard, Edward J. Sivaraman, Ganesh Vázquez-Mayagoitia, Álvaro Vishwanath, Venkatram Cole, Jacqueline M. |
author_sort | Beard, Edward J. |
collection | PubMed |
description | The ability to auto-generate databases of optical properties holds great prospects in data-driven materials discovery for optoelectronic applications. We present a cognate set of experimental and computational data that describes key features of optical absorption spectra. This includes an auto-generated database of 18,309 records of experimentally determined UV/vis absorption maxima, λ(max), and associated extinction coefficients, ϵ, where present. This database was produced using the text-mining toolkit, ChemDataExtractor, on 402,034 scientific documents. High-throughput electronic-structure calculations using fast (simplified Tamm-Dancoff approach) and traditional (time-dependent) density functional theory were executed to predict λ(max) and oscillation strengths, f (related to ϵ) for a subset of validated compounds. Paired quantities of these computational and experimental data show strong correlations in λ(max), f and ϵ, laying the path for reliable in silico calculations of additional optical properties. The total dataset of 8,488 unique compounds and a subset of 5,380 compounds with experimental and computational data, are available in MongoDB, CSV and JSON formats. These can be queried using Python, R, Java, and MATLAB, for data-driven optoelectronic materials discovery. |
format | Online Article Text |
id | pubmed-6895184 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-68951842019-12-13 Comparative dataset of experimental and computational attributes of UV/vis absorption spectra Beard, Edward J. Sivaraman, Ganesh Vázquez-Mayagoitia, Álvaro Vishwanath, Venkatram Cole, Jacqueline M. Sci Data Data Descriptor The ability to auto-generate databases of optical properties holds great prospects in data-driven materials discovery for optoelectronic applications. We present a cognate set of experimental and computational data that describes key features of optical absorption spectra. This includes an auto-generated database of 18,309 records of experimentally determined UV/vis absorption maxima, λ(max), and associated extinction coefficients, ϵ, where present. This database was produced using the text-mining toolkit, ChemDataExtractor, on 402,034 scientific documents. High-throughput electronic-structure calculations using fast (simplified Tamm-Dancoff approach) and traditional (time-dependent) density functional theory were executed to predict λ(max) and oscillation strengths, f (related to ϵ) for a subset of validated compounds. Paired quantities of these computational and experimental data show strong correlations in λ(max), f and ϵ, laying the path for reliable in silico calculations of additional optical properties. The total dataset of 8,488 unique compounds and a subset of 5,380 compounds with experimental and computational data, are available in MongoDB, CSV and JSON formats. These can be queried using Python, R, Java, and MATLAB, for data-driven optoelectronic materials discovery. Nature Publishing Group UK 2019-12-05 /pmc/articles/PMC6895184/ /pubmed/31804487 http://dx.doi.org/10.1038/s41597-019-0306-0 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article. |
spellingShingle | Data Descriptor Beard, Edward J. Sivaraman, Ganesh Vázquez-Mayagoitia, Álvaro Vishwanath, Venkatram Cole, Jacqueline M. Comparative dataset of experimental and computational attributes of UV/vis absorption spectra |
title | Comparative dataset of experimental and computational attributes of UV/vis absorption spectra |
title_full | Comparative dataset of experimental and computational attributes of UV/vis absorption spectra |
title_fullStr | Comparative dataset of experimental and computational attributes of UV/vis absorption spectra |
title_full_unstemmed | Comparative dataset of experimental and computational attributes of UV/vis absorption spectra |
title_short | Comparative dataset of experimental and computational attributes of UV/vis absorption spectra |
title_sort | comparative dataset of experimental and computational attributes of uv/vis absorption spectra |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6895184/ https://www.ncbi.nlm.nih.gov/pubmed/31804487 http://dx.doi.org/10.1038/s41597-019-0306-0 |
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