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Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 1-methyl-3-(prop-2-yn-1-yl)-2,3-di­hydro-1H-1,3-benzo­diazol-2-one

In the title mol­ecule, C(11)H(10)N(2)O, the di­hydro­benzimidazol-2-one moiety is essentially planar, with the prop-2-yn-1-yl substituent rotated well out of this plane. In the crystal, C—H(Mthy)⋯π(ring) inter­actions and C—H(Prop)⋯O(Dhyr) (Mthy = methyl, Prop = prop-2-yn-1-yl and Dhyr = di­hydro)...

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Autores principales: Saber, Asmaa, Srhir, Mohamed, Hökelek, Tuncer, Mague, Joel T., Hamou Ahabchane, Noureddine, Sebbar, Nada Kheira, Essassi, El Mokhtar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6895944/
https://www.ncbi.nlm.nih.gov/pubmed/31871762
http://dx.doi.org/10.1107/S2056989019015779
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author Saber, Asmaa
Srhir, Mohamed
Hökelek, Tuncer
Mague, Joel T.
Hamou Ahabchane, Noureddine
Sebbar, Nada Kheira
Essassi, El Mokhtar
author_facet Saber, Asmaa
Srhir, Mohamed
Hökelek, Tuncer
Mague, Joel T.
Hamou Ahabchane, Noureddine
Sebbar, Nada Kheira
Essassi, El Mokhtar
author_sort Saber, Asmaa
collection PubMed
description In the title mol­ecule, C(11)H(10)N(2)O, the di­hydro­benzimidazol-2-one moiety is essentially planar, with the prop-2-yn-1-yl substituent rotated well out of this plane. In the crystal, C—H(Mthy)⋯π(ring) inter­actions and C—H(Prop)⋯O(Dhyr) (Mthy = methyl, Prop = prop-2-yn-1-yl and Dhyr = di­hydro) hydrogen bonds form corrugated layers parallel to (10[Image: see text]), which are associated through additional C—H(Bnz)⋯O(Dhyr) (Bnz = benzene) hydrogen bonds and head-to-tail, slipped, π-stacking [centroid-to-centroid distance = 3.7712 (7) Å] inter­actions between di­hydro­benzimidazol-2-one moieties. The Hirshfeld surface analysis of the crystal structure indicates that the most important contributions to the crystal packing are from H⋯H (44.1%), H⋯C/C⋯H (33.5%) and O⋯H/H⋯O (13.4%) inter­actions. Hydrogen-bonding and van der Waals inter­actions are the dominant inter­actions in the crystal packing. Computational chemistry calculations indicate that in the crystal, C—H⋯O hydrogen-bond energies are 46.8 and 32.5 (for C—H(Prop)⋯O(Dhyr)) and 20.2 (for C—H(Bnz)⋯O(Dhyr)) kJ mol(−1). Density functional theory (DFT) optimized structures at the B3LYP/6–311 G(d,p) level are compared with the experimentally determined mol­ecular structure in the solid state. The HOMO–LUMO behaviour was elucidated to determine the energy gap.
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spelling pubmed-68959442019-12-23 Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 1-methyl-3-(prop-2-yn-1-yl)-2,3-di­hydro-1H-1,3-benzo­diazol-2-one Saber, Asmaa Srhir, Mohamed Hökelek, Tuncer Mague, Joel T. Hamou Ahabchane, Noureddine Sebbar, Nada Kheira Essassi, El Mokhtar Acta Crystallogr E Crystallogr Commun Research Communications In the title mol­ecule, C(11)H(10)N(2)O, the di­hydro­benzimidazol-2-one moiety is essentially planar, with the prop-2-yn-1-yl substituent rotated well out of this plane. In the crystal, C—H(Mthy)⋯π(ring) inter­actions and C—H(Prop)⋯O(Dhyr) (Mthy = methyl, Prop = prop-2-yn-1-yl and Dhyr = di­hydro) hydrogen bonds form corrugated layers parallel to (10[Image: see text]), which are associated through additional C—H(Bnz)⋯O(Dhyr) (Bnz = benzene) hydrogen bonds and head-to-tail, slipped, π-stacking [centroid-to-centroid distance = 3.7712 (7) Å] inter­actions between di­hydro­benzimidazol-2-one moieties. The Hirshfeld surface analysis of the crystal structure indicates that the most important contributions to the crystal packing are from H⋯H (44.1%), H⋯C/C⋯H (33.5%) and O⋯H/H⋯O (13.4%) inter­actions. Hydrogen-bonding and van der Waals inter­actions are the dominant inter­actions in the crystal packing. Computational chemistry calculations indicate that in the crystal, C—H⋯O hydrogen-bond energies are 46.8 and 32.5 (for C—H(Prop)⋯O(Dhyr)) and 20.2 (for C—H(Bnz)⋯O(Dhyr)) kJ mol(−1). Density functional theory (DFT) optimized structures at the B3LYP/6–311 G(d,p) level are compared with the experimentally determined mol­ecular structure in the solid state. The HOMO–LUMO behaviour was elucidated to determine the energy gap. International Union of Crystallography 2019-11-29 /pmc/articles/PMC6895944/ /pubmed/31871762 http://dx.doi.org/10.1107/S2056989019015779 Text en © Saber et al. 2019 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Saber, Asmaa
Srhir, Mohamed
Hökelek, Tuncer
Mague, Joel T.
Hamou Ahabchane, Noureddine
Sebbar, Nada Kheira
Essassi, El Mokhtar
Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 1-methyl-3-(prop-2-yn-1-yl)-2,3-di­hydro-1H-1,3-benzo­diazol-2-one
title Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 1-methyl-3-(prop-2-yn-1-yl)-2,3-di­hydro-1H-1,3-benzo­diazol-2-one
title_full Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 1-methyl-3-(prop-2-yn-1-yl)-2,3-di­hydro-1H-1,3-benzo­diazol-2-one
title_fullStr Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 1-methyl-3-(prop-2-yn-1-yl)-2,3-di­hydro-1H-1,3-benzo­diazol-2-one
title_full_unstemmed Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 1-methyl-3-(prop-2-yn-1-yl)-2,3-di­hydro-1H-1,3-benzo­diazol-2-one
title_short Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 1-methyl-3-(prop-2-yn-1-yl)-2,3-di­hydro-1H-1,3-benzo­diazol-2-one
title_sort crystal structure, hirshfeld surface analysis and inter­action energy and dft studies of 1-methyl-3-(prop-2-yn-1-yl)-2,3-di­hydro-1h-1,3-benzo­diazol-2-one
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6895944/
https://www.ncbi.nlm.nih.gov/pubmed/31871762
http://dx.doi.org/10.1107/S2056989019015779
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