Cargando…

A preliminary investigation of rare variants associated with genetic risk for PTSD in a natural disaster-exposed adolescent sample

Background: Posttraumatic stress disorder (PTSD) involves a complex interaction of biological, psychological, and social factors. Numerous studies have demonstrated genetic variation associated with the development of PTSD, primarily in adults. However, the contribution of low frequency and rare gen...

Descripción completa

Detalles Bibliográficos
Autores principales: Sheerin, Christina M., Vladimirov, Vladimir, Williamson, Vernell, Bountress, Kaitlin, K. Danielson, Carla, Ruggiero, Kenneth, Amstadter, Ananda B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6896412/
https://www.ncbi.nlm.nih.gov/pubmed/31839899
http://dx.doi.org/10.1080/20008198.2019.1688935
_version_ 1783476773368889344
author Sheerin, Christina M.
Vladimirov, Vladimir
Williamson, Vernell
Bountress, Kaitlin
K. Danielson, Carla
Ruggiero, Kenneth
Amstadter, Ananda B.
author_facet Sheerin, Christina M.
Vladimirov, Vladimir
Williamson, Vernell
Bountress, Kaitlin
K. Danielson, Carla
Ruggiero, Kenneth
Amstadter, Ananda B.
author_sort Sheerin, Christina M.
collection PubMed
description Background: Posttraumatic stress disorder (PTSD) involves a complex interaction of biological, psychological, and social factors. Numerous studies have demonstrated genetic variation associated with the development of PTSD, primarily in adults. However, the contribution of low frequency and rare genetic variants to PTSD is unknown to date. Moreover, there is limited work on genetic risk for PTSD in child and adolescent populations. Objective: This preliminary study aimed to identify the low frequency and rare genetic variation that contributes to PTSD using an exome array. Method: This post-disaster, adolescent sample (n = 707, 51% females, M(age) = 14.54) was assessed for PTSD diagnosis and symptom count following tornado exposure. Results: Gene-based models, covarying for ancestry principal components, age, sex, tornado severity, and previous trauma identified variants in four genes associated with diagnosis and 276 genes associated with symptom count (at p(adj) < .001). Functional class analyses suggested an association with variants in the nonsense class (nonsynonymous variant that results in truncation of, and usually non-functional, protein) with both outcomes. An exploratory gene network pathway analysis showed a great number of significant genes involved in brain and immune function, illustrating the usefulness of downstream examination of gene-based findings that may point to relevant biological processes. Conclusions: While further investigation in larger samples is warranted, findings align with extant PTSD literature that has identified variants associated with biological conditions such as immune function.
format Online
Article
Text
id pubmed-6896412
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-68964122019-12-13 A preliminary investigation of rare variants associated with genetic risk for PTSD in a natural disaster-exposed adolescent sample Sheerin, Christina M. Vladimirov, Vladimir Williamson, Vernell Bountress, Kaitlin K. Danielson, Carla Ruggiero, Kenneth Amstadter, Ananda B. Eur J Psychotraumatol Clinical Research Article Background: Posttraumatic stress disorder (PTSD) involves a complex interaction of biological, psychological, and social factors. Numerous studies have demonstrated genetic variation associated with the development of PTSD, primarily in adults. However, the contribution of low frequency and rare genetic variants to PTSD is unknown to date. Moreover, there is limited work on genetic risk for PTSD in child and adolescent populations. Objective: This preliminary study aimed to identify the low frequency and rare genetic variation that contributes to PTSD using an exome array. Method: This post-disaster, adolescent sample (n = 707, 51% females, M(age) = 14.54) was assessed for PTSD diagnosis and symptom count following tornado exposure. Results: Gene-based models, covarying for ancestry principal components, age, sex, tornado severity, and previous trauma identified variants in four genes associated with diagnosis and 276 genes associated with symptom count (at p(adj) < .001). Functional class analyses suggested an association with variants in the nonsense class (nonsynonymous variant that results in truncation of, and usually non-functional, protein) with both outcomes. An exploratory gene network pathway analysis showed a great number of significant genes involved in brain and immune function, illustrating the usefulness of downstream examination of gene-based findings that may point to relevant biological processes. Conclusions: While further investigation in larger samples is warranted, findings align with extant PTSD literature that has identified variants associated with biological conditions such as immune function. Taylor & Francis 2019-12-02 /pmc/articles/PMC6896412/ /pubmed/31839899 http://dx.doi.org/10.1080/20008198.2019.1688935 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Clinical Research Article
Sheerin, Christina M.
Vladimirov, Vladimir
Williamson, Vernell
Bountress, Kaitlin
K. Danielson, Carla
Ruggiero, Kenneth
Amstadter, Ananda B.
A preliminary investigation of rare variants associated with genetic risk for PTSD in a natural disaster-exposed adolescent sample
title A preliminary investigation of rare variants associated with genetic risk for PTSD in a natural disaster-exposed adolescent sample
title_full A preliminary investigation of rare variants associated with genetic risk for PTSD in a natural disaster-exposed adolescent sample
title_fullStr A preliminary investigation of rare variants associated with genetic risk for PTSD in a natural disaster-exposed adolescent sample
title_full_unstemmed A preliminary investigation of rare variants associated with genetic risk for PTSD in a natural disaster-exposed adolescent sample
title_short A preliminary investigation of rare variants associated with genetic risk for PTSD in a natural disaster-exposed adolescent sample
title_sort preliminary investigation of rare variants associated with genetic risk for ptsd in a natural disaster-exposed adolescent sample
topic Clinical Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6896412/
https://www.ncbi.nlm.nih.gov/pubmed/31839899
http://dx.doi.org/10.1080/20008198.2019.1688935
work_keys_str_mv AT sheerinchristinam apreliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT vladimirovvladimir apreliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT williamsonvernell apreliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT bountresskaitlin apreliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT kdanielsoncarla apreliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT ruggierokenneth apreliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT amstadteranandab apreliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT sheerinchristinam preliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT vladimirovvladimir preliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT williamsonvernell preliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT bountresskaitlin preliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT kdanielsoncarla preliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT ruggierokenneth preliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample
AT amstadteranandab preliminaryinvestigationofrarevariantsassociatedwithgeneticriskforptsdinanaturaldisasterexposedadolescentsample