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LONGITUDINAL MOLECULAR TRAJECTORIES OF DIFFUSE GLIOMA IN ADULTS
The evolutionary processes that drive universal therapeutic resistance in adult patients with diffuse glioma remain unclear(1,2). Here, we analyzed temporally separated DNA sequencing data and matched clinical annotation from 222 patients with glioma. Through mutational and copy number analyses acro...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6897368/ https://www.ncbi.nlm.nih.gov/pubmed/31748746 http://dx.doi.org/10.1038/s41586-019-1775-1 |
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author | Barthel, Floris P. Johnson, Kevin C. Varn, Frederick S. Moskalik, Anzhela D. Tanner, Georgette Kocakavuk, Emre Anderson, Kevin J. Abiola, Olajide Aldape, Kenneth Alfaro, Kristin D. Alpar, Donat Amin, Samirkumar B. Ashley, David M. Bandopadhayay, Pratiti Barnholtz-Sloan, Jill S. Beroukhim, Rameen Bock, Christoph Brastianos, Priscilla K. Brat, Daniel J. Brodbelt, Andrew R. Bruns, Alexander F. Bulsara, Ketan R. Chakrabarty, Aruna Chakravarti, Arnab Chuang, Jeffrey H. Claus, Elizabeth B. Cochran, Elizabeth J. Connelly, Jennifer Costello, Joseph F. Finocchiaro, Gaetano Fletcher, Michael N. French, Pim J. Gan, Hui K. Gilbert, Mark R. Gould, Peter V. Grimmer, Matthew R. Iavarone, Antonio Ismail, Azzam Jenkinson, Michael D. Khasraw, Mustafa Kim, Hoon Kouwenhoven, Mathilde C.M. LaViolette, Peter S. Li, Meihong Lichter, Peter Ligon, Keith L. Lowman, Allison K. Malta, Tathiane M. Mazor, Tali McDonald, Kerrie L. Molinaro, Annette M. Nam, Do-Hyun Nayyar, Naema Ng, Ho Keung Ngan, Chew Yee Niclou, Simone, P. Niers, Johanna M. Noushmehr, Houtan Noorbakhsh, Javad Ormond, D. Ryan Park, Chul-Kee Poisson, Laila M. Rabadan, Raul Radlwimmer, Bernhard Rao, Ganesh Reifenberger, Guido Sa, Jason K. Schuster, Michael Shaw, Brian L. Short, Susan C. Sillevis Smitt, Peter A. Sloan, Andrew E. Smits, Marion Suzuki, Hiromichi Tabatabai, Ghazaleh Van Meir, Erwin G. Watts, Colin Weller, Michael Wesseling, Pieter Westerman, Bart A. Widhalm, Georg Woehrer, Adelheid Alfred Yung, W.K. Zadeh, Gelareh Huse, Jason T. de Groot, John F. Stead, Lucy F. Verhaak, Roel G.W. |
author_facet | Barthel, Floris P. Johnson, Kevin C. Varn, Frederick S. Moskalik, Anzhela D. Tanner, Georgette Kocakavuk, Emre Anderson, Kevin J. Abiola, Olajide Aldape, Kenneth Alfaro, Kristin D. Alpar, Donat Amin, Samirkumar B. Ashley, David M. Bandopadhayay, Pratiti Barnholtz-Sloan, Jill S. Beroukhim, Rameen Bock, Christoph Brastianos, Priscilla K. Brat, Daniel J. Brodbelt, Andrew R. Bruns, Alexander F. Bulsara, Ketan R. Chakrabarty, Aruna Chakravarti, Arnab Chuang, Jeffrey H. Claus, Elizabeth B. Cochran, Elizabeth J. Connelly, Jennifer Costello, Joseph F. Finocchiaro, Gaetano Fletcher, Michael N. French, Pim J. Gan, Hui K. Gilbert, Mark R. Gould, Peter V. Grimmer, Matthew R. Iavarone, Antonio Ismail, Azzam Jenkinson, Michael D. Khasraw, Mustafa Kim, Hoon Kouwenhoven, Mathilde C.M. LaViolette, Peter S. Li, Meihong Lichter, Peter Ligon, Keith L. Lowman, Allison K. Malta, Tathiane M. Mazor, Tali McDonald, Kerrie L. Molinaro, Annette M. Nam, Do-Hyun Nayyar, Naema Ng, Ho Keung Ngan, Chew Yee Niclou, Simone, P. Niers, Johanna M. Noushmehr, Houtan Noorbakhsh, Javad Ormond, D. Ryan Park, Chul-Kee Poisson, Laila M. Rabadan, Raul Radlwimmer, Bernhard Rao, Ganesh Reifenberger, Guido Sa, Jason K. Schuster, Michael Shaw, Brian L. Short, Susan C. Sillevis Smitt, Peter A. Sloan, Andrew E. Smits, Marion Suzuki, Hiromichi Tabatabai, Ghazaleh Van Meir, Erwin G. Watts, Colin Weller, Michael Wesseling, Pieter Westerman, Bart A. Widhalm, Georg Woehrer, Adelheid Alfred Yung, W.K. Zadeh, Gelareh Huse, Jason T. de Groot, John F. Stead, Lucy F. Verhaak, Roel G.W. |
collection | PubMed |
description | The evolutionary processes that drive universal therapeutic resistance in adult patients with diffuse glioma remain unclear(1,2). Here, we analyzed temporally separated DNA sequencing data and matched clinical annotation from 222 patients with glioma. Through mutational and copy number analyses across the three major subtypes of diffuse glioma, we observed that driver genes detected at initial disease were retained at recurrence, while there was little evidence of recurrence-specific gene alterations. Treatment with alkylating-agents resulted in a hypermutator phenotype at different rates across glioma subtypes, and hypermutation was not associated with differences in survival. Acquired aneuploidy was frequently detected in recurrent gliomas characterized by presence of an IDH mutation but without 1p/19q codeletion and further converged with acquired cell cycle alterations and poor outcomes. We show that the clonal architecture of each tumor remains similar over time and that absence of clonal selection was associated with increased survival. Finally, we did not observe differences in immunoediting levels between initial and recurrent glioma. Our results collectively argue that the strongest selective pressures occur early during glioma development and that current therapies shape this evolution in a largely stochastic manner. |
format | Online Article Text |
id | pubmed-6897368 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
record_format | MEDLINE/PubMed |
spelling | pubmed-68973682020-05-20 LONGITUDINAL MOLECULAR TRAJECTORIES OF DIFFUSE GLIOMA IN ADULTS Barthel, Floris P. Johnson, Kevin C. Varn, Frederick S. Moskalik, Anzhela D. Tanner, Georgette Kocakavuk, Emre Anderson, Kevin J. Abiola, Olajide Aldape, Kenneth Alfaro, Kristin D. Alpar, Donat Amin, Samirkumar B. Ashley, David M. Bandopadhayay, Pratiti Barnholtz-Sloan, Jill S. Beroukhim, Rameen Bock, Christoph Brastianos, Priscilla K. Brat, Daniel J. Brodbelt, Andrew R. Bruns, Alexander F. Bulsara, Ketan R. Chakrabarty, Aruna Chakravarti, Arnab Chuang, Jeffrey H. Claus, Elizabeth B. Cochran, Elizabeth J. Connelly, Jennifer Costello, Joseph F. Finocchiaro, Gaetano Fletcher, Michael N. French, Pim J. Gan, Hui K. Gilbert, Mark R. Gould, Peter V. Grimmer, Matthew R. Iavarone, Antonio Ismail, Azzam Jenkinson, Michael D. Khasraw, Mustafa Kim, Hoon Kouwenhoven, Mathilde C.M. LaViolette, Peter S. Li, Meihong Lichter, Peter Ligon, Keith L. Lowman, Allison K. Malta, Tathiane M. Mazor, Tali McDonald, Kerrie L. Molinaro, Annette M. Nam, Do-Hyun Nayyar, Naema Ng, Ho Keung Ngan, Chew Yee Niclou, Simone, P. Niers, Johanna M. Noushmehr, Houtan Noorbakhsh, Javad Ormond, D. Ryan Park, Chul-Kee Poisson, Laila M. Rabadan, Raul Radlwimmer, Bernhard Rao, Ganesh Reifenberger, Guido Sa, Jason K. Schuster, Michael Shaw, Brian L. Short, Susan C. Sillevis Smitt, Peter A. Sloan, Andrew E. Smits, Marion Suzuki, Hiromichi Tabatabai, Ghazaleh Van Meir, Erwin G. Watts, Colin Weller, Michael Wesseling, Pieter Westerman, Bart A. Widhalm, Georg Woehrer, Adelheid Alfred Yung, W.K. Zadeh, Gelareh Huse, Jason T. de Groot, John F. Stead, Lucy F. Verhaak, Roel G.W. Nature Article The evolutionary processes that drive universal therapeutic resistance in adult patients with diffuse glioma remain unclear(1,2). Here, we analyzed temporally separated DNA sequencing data and matched clinical annotation from 222 patients with glioma. Through mutational and copy number analyses across the three major subtypes of diffuse glioma, we observed that driver genes detected at initial disease were retained at recurrence, while there was little evidence of recurrence-specific gene alterations. Treatment with alkylating-agents resulted in a hypermutator phenotype at different rates across glioma subtypes, and hypermutation was not associated with differences in survival. Acquired aneuploidy was frequently detected in recurrent gliomas characterized by presence of an IDH mutation but without 1p/19q codeletion and further converged with acquired cell cycle alterations and poor outcomes. We show that the clonal architecture of each tumor remains similar over time and that absence of clonal selection was associated with increased survival. Finally, we did not observe differences in immunoediting levels between initial and recurrent glioma. Our results collectively argue that the strongest selective pressures occur early during glioma development and that current therapies shape this evolution in a largely stochastic manner. 2019-11-20 2019-12 /pmc/articles/PMC6897368/ /pubmed/31748746 http://dx.doi.org/10.1038/s41586-019-1775-1 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms |
spellingShingle | Article Barthel, Floris P. Johnson, Kevin C. Varn, Frederick S. Moskalik, Anzhela D. Tanner, Georgette Kocakavuk, Emre Anderson, Kevin J. Abiola, Olajide Aldape, Kenneth Alfaro, Kristin D. Alpar, Donat Amin, Samirkumar B. Ashley, David M. Bandopadhayay, Pratiti Barnholtz-Sloan, Jill S. Beroukhim, Rameen Bock, Christoph Brastianos, Priscilla K. Brat, Daniel J. Brodbelt, Andrew R. Bruns, Alexander F. Bulsara, Ketan R. Chakrabarty, Aruna Chakravarti, Arnab Chuang, Jeffrey H. Claus, Elizabeth B. Cochran, Elizabeth J. Connelly, Jennifer Costello, Joseph F. Finocchiaro, Gaetano Fletcher, Michael N. French, Pim J. Gan, Hui K. Gilbert, Mark R. Gould, Peter V. Grimmer, Matthew R. Iavarone, Antonio Ismail, Azzam Jenkinson, Michael D. Khasraw, Mustafa Kim, Hoon Kouwenhoven, Mathilde C.M. LaViolette, Peter S. Li, Meihong Lichter, Peter Ligon, Keith L. Lowman, Allison K. Malta, Tathiane M. Mazor, Tali McDonald, Kerrie L. Molinaro, Annette M. Nam, Do-Hyun Nayyar, Naema Ng, Ho Keung Ngan, Chew Yee Niclou, Simone, P. Niers, Johanna M. Noushmehr, Houtan Noorbakhsh, Javad Ormond, D. Ryan Park, Chul-Kee Poisson, Laila M. Rabadan, Raul Radlwimmer, Bernhard Rao, Ganesh Reifenberger, Guido Sa, Jason K. Schuster, Michael Shaw, Brian L. Short, Susan C. Sillevis Smitt, Peter A. Sloan, Andrew E. Smits, Marion Suzuki, Hiromichi Tabatabai, Ghazaleh Van Meir, Erwin G. Watts, Colin Weller, Michael Wesseling, Pieter Westerman, Bart A. Widhalm, Georg Woehrer, Adelheid Alfred Yung, W.K. Zadeh, Gelareh Huse, Jason T. de Groot, John F. Stead, Lucy F. Verhaak, Roel G.W. LONGITUDINAL MOLECULAR TRAJECTORIES OF DIFFUSE GLIOMA IN ADULTS |
title | LONGITUDINAL MOLECULAR TRAJECTORIES OF DIFFUSE GLIOMA IN ADULTS |
title_full | LONGITUDINAL MOLECULAR TRAJECTORIES OF DIFFUSE GLIOMA IN ADULTS |
title_fullStr | LONGITUDINAL MOLECULAR TRAJECTORIES OF DIFFUSE GLIOMA IN ADULTS |
title_full_unstemmed | LONGITUDINAL MOLECULAR TRAJECTORIES OF DIFFUSE GLIOMA IN ADULTS |
title_short | LONGITUDINAL MOLECULAR TRAJECTORIES OF DIFFUSE GLIOMA IN ADULTS |
title_sort | longitudinal molecular trajectories of diffuse glioma in adults |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6897368/ https://www.ncbi.nlm.nih.gov/pubmed/31748746 http://dx.doi.org/10.1038/s41586-019-1775-1 |
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