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Hybrid modeling frameworks of tumor development and treatment

Tumors are complex multicellular heterogeneous systems comprised of components that interact with and modify one another. Tumor development depends on multiple factors: intrinsic, such as genetic mutations, altered signaling pathways, or variable receptor expression; and extrinsic, such as differenc...

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Autores principales: Chamseddine, Ibrahim M., Rejniak, Katarzyna A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6898741/
https://www.ncbi.nlm.nih.gov/pubmed/31313504
http://dx.doi.org/10.1002/wsbm.1461
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author Chamseddine, Ibrahim M.
Rejniak, Katarzyna A.
author_facet Chamseddine, Ibrahim M.
Rejniak, Katarzyna A.
author_sort Chamseddine, Ibrahim M.
collection PubMed
description Tumors are complex multicellular heterogeneous systems comprised of components that interact with and modify one another. Tumor development depends on multiple factors: intrinsic, such as genetic mutations, altered signaling pathways, or variable receptor expression; and extrinsic, such as differences in nutrient supply, crosstalk with stromal or immune cells, or variable composition of the surrounding extracellular matrix. Tumors are also characterized by high cellular heterogeneity and dynamically changing tumor microenvironments. The complexity increases when this multiscale, multicomponent system is perturbed by anticancer treatments. Modeling such complex systems and predicting how tumors will respond to therapies require mathematical models that can handle various types of information and combine diverse theoretical methods on multiple temporal and spatial scales, that is, hybrid models. In this update, we discuss the progress that has been achieved during the last 10 years in the area of the hybrid modeling of tumors. The classical definition of hybrid models refers to the coupling of discrete descriptions of cells with continuous descriptions of microenvironmental factors. To reflect on the direction that the modeling field has taken, we propose extending the definition of hybrid models to include of coupling two or more different mathematical frameworks. Thus, in addition to discussing recent advances in discrete/continuous modeling, we also discuss how these two mathematical descriptions can be coupled with theoretical frameworks of optimal control, optimization, fluid dynamics, game theory, and machine learning. All these methods will be illustrated with applications to tumor development and various anticancer treatments. This article is characterized under: Analytical and Computational Methods > Computational Methods. Translational, Genomic, and Systems Medicine > Therapeutic Methods. Models of Systems Properties and Processes > Organ, Tissue, and Physiological Models.
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spelling pubmed-68987412019-12-17 Hybrid modeling frameworks of tumor development and treatment Chamseddine, Ibrahim M. Rejniak, Katarzyna A. Wiley Interdiscip Rev Syst Biol Med Updates Tumors are complex multicellular heterogeneous systems comprised of components that interact with and modify one another. Tumor development depends on multiple factors: intrinsic, such as genetic mutations, altered signaling pathways, or variable receptor expression; and extrinsic, such as differences in nutrient supply, crosstalk with stromal or immune cells, or variable composition of the surrounding extracellular matrix. Tumors are also characterized by high cellular heterogeneity and dynamically changing tumor microenvironments. The complexity increases when this multiscale, multicomponent system is perturbed by anticancer treatments. Modeling such complex systems and predicting how tumors will respond to therapies require mathematical models that can handle various types of information and combine diverse theoretical methods on multiple temporal and spatial scales, that is, hybrid models. In this update, we discuss the progress that has been achieved during the last 10 years in the area of the hybrid modeling of tumors. The classical definition of hybrid models refers to the coupling of discrete descriptions of cells with continuous descriptions of microenvironmental factors. To reflect on the direction that the modeling field has taken, we propose extending the definition of hybrid models to include of coupling two or more different mathematical frameworks. Thus, in addition to discussing recent advances in discrete/continuous modeling, we also discuss how these two mathematical descriptions can be coupled with theoretical frameworks of optimal control, optimization, fluid dynamics, game theory, and machine learning. All these methods will be illustrated with applications to tumor development and various anticancer treatments. This article is characterized under: Analytical and Computational Methods > Computational Methods. Translational, Genomic, and Systems Medicine > Therapeutic Methods. Models of Systems Properties and Processes > Organ, Tissue, and Physiological Models. John Wiley & Sons, Inc. 2019-07-17 2020 /pmc/articles/PMC6898741/ /pubmed/31313504 http://dx.doi.org/10.1002/wsbm.1461 Text en © 2019 The Authors. WIREs Systems Biology and Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Updates
Chamseddine, Ibrahim M.
Rejniak, Katarzyna A.
Hybrid modeling frameworks of tumor development and treatment
title Hybrid modeling frameworks of tumor development and treatment
title_full Hybrid modeling frameworks of tumor development and treatment
title_fullStr Hybrid modeling frameworks of tumor development and treatment
title_full_unstemmed Hybrid modeling frameworks of tumor development and treatment
title_short Hybrid modeling frameworks of tumor development and treatment
title_sort hybrid modeling frameworks of tumor development and treatment
topic Updates
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6898741/
https://www.ncbi.nlm.nih.gov/pubmed/31313504
http://dx.doi.org/10.1002/wsbm.1461
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