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Leaf venation networks of Bornean trees: images and hand‐traced segmentations

The data set contains images of leaf venation networks obtained from tree species in Malaysian Borneo. The data set contains 726 leaves from 295 species comprising 50 families, sampled from eight forest plots in Sabah. Image extents are approximately 1 × 1 cm, or 50 megapixels. All images contain a...

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Autores principales: Blonder, Benjamin, Both, Sabine, Jodra, Miguel, Majalap, Noreen, Burslem, David, Teh, Yit Arn, Malhi, Yadvinder
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6899953/
https://www.ncbi.nlm.nih.gov/pubmed/31336398
http://dx.doi.org/10.1002/ecy.2844
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author Blonder, Benjamin
Both, Sabine
Jodra, Miguel
Majalap, Noreen
Burslem, David
Teh, Yit Arn
Malhi, Yadvinder
author_facet Blonder, Benjamin
Both, Sabine
Jodra, Miguel
Majalap, Noreen
Burslem, David
Teh, Yit Arn
Malhi, Yadvinder
author_sort Blonder, Benjamin
collection PubMed
description The data set contains images of leaf venation networks obtained from tree species in Malaysian Borneo. The data set contains 726 leaves from 295 species comprising 50 families, sampled from eight forest plots in Sabah. Image extents are approximately 1 × 1 cm, or 50 megapixels. All images contain a region of interest in which all veins have been hand traced. The complete data set includes over 30 billion pixels, of which more than 600 million have been validated by hand tracing. These images are suitable for morphological characterization of these species, as well as for training of machine‐learning algorithms that segment biological networks from images. Data are made available under the Open Data Commons Attribution License. You are free to copy, distribute, and use the database; to produce works from the database; and to modify, transform, and build upon the database. You must attribute any public use of the database, or works produced from the database, in the manner specified in the license. For any use or redistribution of the database, or works produced from it, you must make clear to others the license of the database and keep intact any notices on the original database.
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spelling pubmed-68999532019-12-20 Leaf venation networks of Bornean trees: images and hand‐traced segmentations Blonder, Benjamin Both, Sabine Jodra, Miguel Majalap, Noreen Burslem, David Teh, Yit Arn Malhi, Yadvinder Ecology Data Papers The data set contains images of leaf venation networks obtained from tree species in Malaysian Borneo. The data set contains 726 leaves from 295 species comprising 50 families, sampled from eight forest plots in Sabah. Image extents are approximately 1 × 1 cm, or 50 megapixels. All images contain a region of interest in which all veins have been hand traced. The complete data set includes over 30 billion pixels, of which more than 600 million have been validated by hand tracing. These images are suitable for morphological characterization of these species, as well as for training of machine‐learning algorithms that segment biological networks from images. Data are made available under the Open Data Commons Attribution License. You are free to copy, distribute, and use the database; to produce works from the database; and to modify, transform, and build upon the database. You must attribute any public use of the database, or works produced from the database, in the manner specified in the license. For any use or redistribution of the database, or works produced from it, you must make clear to others the license of the database and keep intact any notices on the original database. John Wiley and Sons Inc. 2019-08-16 2019-11 /pmc/articles/PMC6899953/ /pubmed/31336398 http://dx.doi.org/10.1002/ecy.2844 Text en © 2019 The Authors. Ecology published by Wiley Periodicals, Inc. on behalf of The Ecological Society of America. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Data Papers
Blonder, Benjamin
Both, Sabine
Jodra, Miguel
Majalap, Noreen
Burslem, David
Teh, Yit Arn
Malhi, Yadvinder
Leaf venation networks of Bornean trees: images and hand‐traced segmentations
title Leaf venation networks of Bornean trees: images and hand‐traced segmentations
title_full Leaf venation networks of Bornean trees: images and hand‐traced segmentations
title_fullStr Leaf venation networks of Bornean trees: images and hand‐traced segmentations
title_full_unstemmed Leaf venation networks of Bornean trees: images and hand‐traced segmentations
title_short Leaf venation networks of Bornean trees: images and hand‐traced segmentations
title_sort leaf venation networks of bornean trees: images and hand‐traced segmentations
topic Data Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6899953/
https://www.ncbi.nlm.nih.gov/pubmed/31336398
http://dx.doi.org/10.1002/ecy.2844
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