Cargando…

A modelling approach for correcting reporting delays in disease surveillance data

One difficulty for real‐time tracking of epidemics is related to reporting delay. The reporting delay may be due to laboratory confirmation, logistical problems, infrastructure difficulties, and so on. The ability to correct the available information as quickly as possible is crucial, in terms of de...

Descripción completa

Detalles Bibliográficos
Autores principales: Bastos, Leonardo S, Economou, Theodoros, Gomes, Marcelo F C, Villela, Daniel A M, Coelho, Flavio C, Cruz, Oswaldo G, Stoner, Oliver, Bailey, Trevor, Codeço, Claudia T
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6900153/
https://www.ncbi.nlm.nih.gov/pubmed/31292995
http://dx.doi.org/10.1002/sim.8303
_version_ 1783477292839731200
author Bastos, Leonardo S
Economou, Theodoros
Gomes, Marcelo F C
Villela, Daniel A M
Coelho, Flavio C
Cruz, Oswaldo G
Stoner, Oliver
Bailey, Trevor
Codeço, Claudia T
author_facet Bastos, Leonardo S
Economou, Theodoros
Gomes, Marcelo F C
Villela, Daniel A M
Coelho, Flavio C
Cruz, Oswaldo G
Stoner, Oliver
Bailey, Trevor
Codeço, Claudia T
author_sort Bastos, Leonardo S
collection PubMed
description One difficulty for real‐time tracking of epidemics is related to reporting delay. The reporting delay may be due to laboratory confirmation, logistical problems, infrastructure difficulties, and so on. The ability to correct the available information as quickly as possible is crucial, in terms of decision making such as issuing warnings to the public and local authorities. A Bayesian hierarchical modelling approach is proposed as a flexible way of correcting the reporting delays and to quantify the associated uncertainty. Implementation of the model is fast due to the use of the integrated nested Laplace approximation. The approach is illustrated on dengue fever incidence data in Rio de Janeiro, and severe acute respiratory infection data in the state of Paraná, Brazil.
format Online
Article
Text
id pubmed-6900153
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-69001532019-12-20 A modelling approach for correcting reporting delays in disease surveillance data Bastos, Leonardo S Economou, Theodoros Gomes, Marcelo F C Villela, Daniel A M Coelho, Flavio C Cruz, Oswaldo G Stoner, Oliver Bailey, Trevor Codeço, Claudia T Stat Med Research Articles One difficulty for real‐time tracking of epidemics is related to reporting delay. The reporting delay may be due to laboratory confirmation, logistical problems, infrastructure difficulties, and so on. The ability to correct the available information as quickly as possible is crucial, in terms of decision making such as issuing warnings to the public and local authorities. A Bayesian hierarchical modelling approach is proposed as a flexible way of correcting the reporting delays and to quantify the associated uncertainty. Implementation of the model is fast due to the use of the integrated nested Laplace approximation. The approach is illustrated on dengue fever incidence data in Rio de Janeiro, and severe acute respiratory infection data in the state of Paraná, Brazil. John Wiley and Sons Inc. 2019-07-10 2019-09-30 /pmc/articles/PMC6900153/ /pubmed/31292995 http://dx.doi.org/10.1002/sim.8303 Text en © 2019 The Authors Statistics in Medicine Published by John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Bastos, Leonardo S
Economou, Theodoros
Gomes, Marcelo F C
Villela, Daniel A M
Coelho, Flavio C
Cruz, Oswaldo G
Stoner, Oliver
Bailey, Trevor
Codeço, Claudia T
A modelling approach for correcting reporting delays in disease surveillance data
title A modelling approach for correcting reporting delays in disease surveillance data
title_full A modelling approach for correcting reporting delays in disease surveillance data
title_fullStr A modelling approach for correcting reporting delays in disease surveillance data
title_full_unstemmed A modelling approach for correcting reporting delays in disease surveillance data
title_short A modelling approach for correcting reporting delays in disease surveillance data
title_sort modelling approach for correcting reporting delays in disease surveillance data
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6900153/
https://www.ncbi.nlm.nih.gov/pubmed/31292995
http://dx.doi.org/10.1002/sim.8303
work_keys_str_mv AT bastosleonardos amodellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT economoutheodoros amodellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT gomesmarcelofc amodellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT villeladanielam amodellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT coelhoflavioc amodellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT cruzoswaldog amodellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT stoneroliver amodellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT baileytrevor amodellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT codecoclaudiat amodellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT bastosleonardos modellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT economoutheodoros modellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT gomesmarcelofc modellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT villeladanielam modellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT coelhoflavioc modellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT cruzoswaldog modellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT stoneroliver modellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT baileytrevor modellingapproachforcorrectingreportingdelaysindiseasesurveillancedata
AT codecoclaudiat modellingapproachforcorrectingreportingdelaysindiseasesurveillancedata