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Targeted sequencing identifies novel variants in common and rare MODY genes

BACKGROUND: Maturity‐onset diabetes of the young (MODY) is a form of monogenic diabetes with autosomal dominant inheritance. To date, mutations in 11 genes have been frequently associated with this phenotype. In Brazil, few cohorts have been screened for MODY, all using a candidate gene approach, wi...

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Autores principales: de Santana, Lucas S., Caetano, Lilian A., Costa‐Riquetto, Aline D., Franco, Pedro C., Dotto, Renata P., Reis, André F., Weinert, Letícia S., Silveiro, Sandra P., Vendramini, Marcio F., do Prado, Flaviene A., Abrahão, Giovanna C. P., de Almeida, Ana Gregória F. P., Tavares, Maria da G. Rodrigues, Gonçalves, Wagner Rodrigo B., Santomauro Junior, Augusto C., Halpern, Bruno, Jorge, Alexander A. L., Nery, Marcia, Teles, Milena G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6900361/
https://www.ncbi.nlm.nih.gov/pubmed/31595705
http://dx.doi.org/10.1002/mgg3.962
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author de Santana, Lucas S.
Caetano, Lilian A.
Costa‐Riquetto, Aline D.
Franco, Pedro C.
Dotto, Renata P.
Reis, André F.
Weinert, Letícia S.
Silveiro, Sandra P.
Vendramini, Marcio F.
do Prado, Flaviene A.
Abrahão, Giovanna C. P.
de Almeida, Ana Gregória F. P.
Tavares, Maria da G. Rodrigues
Gonçalves, Wagner Rodrigo B.
Santomauro Junior, Augusto C.
Halpern, Bruno
Jorge, Alexander A. L.
Nery, Marcia
Teles, Milena G.
author_facet de Santana, Lucas S.
Caetano, Lilian A.
Costa‐Riquetto, Aline D.
Franco, Pedro C.
Dotto, Renata P.
Reis, André F.
Weinert, Letícia S.
Silveiro, Sandra P.
Vendramini, Marcio F.
do Prado, Flaviene A.
Abrahão, Giovanna C. P.
de Almeida, Ana Gregória F. P.
Tavares, Maria da G. Rodrigues
Gonçalves, Wagner Rodrigo B.
Santomauro Junior, Augusto C.
Halpern, Bruno
Jorge, Alexander A. L.
Nery, Marcia
Teles, Milena G.
author_sort de Santana, Lucas S.
collection PubMed
description BACKGROUND: Maturity‐onset diabetes of the young (MODY) is a form of monogenic diabetes with autosomal dominant inheritance. To date, mutations in 11 genes have been frequently associated with this phenotype. In Brazil, few cohorts have been screened for MODY, all using a candidate gene approach, with a high prevalence of undiagnosed cases (MODY‐X). METHODS: We conducted a next‐generation sequencing target panel (tNGS) study to investigate, for the first time, a Brazilian cohort of MODY patients with a negative prior genetic analysis. One hundred and two patients were selected, of which 26 had an initial clinical suspicion of MODY‐GCK and 76 were non‐GCK MODY. RESULTS: After excluding all benign and likely benign variants and variants of uncertain significance, we were able to assign a genetic cause for 12.7% (13/102) of the probands. Three rare MODY subtypes were identified (PDX1/NEUROD1/ABCC8), and eight variants had not been previously described/mapped in genomic databases. Important clinical findings were evidenced in some cases after genetic diagnosis, such as MODY‐PDX1/HNF1B. CONCLUSION: A multiloci genetic approach allowed the identification of rare MODY subtypes, reducing the large percentage of MODY‐X in Brazilian cases and contributing to a better clinical, therapeutic, and prognostic characterization of these rare phenotypes.
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spelling pubmed-69003612019-12-20 Targeted sequencing identifies novel variants in common and rare MODY genes de Santana, Lucas S. Caetano, Lilian A. Costa‐Riquetto, Aline D. Franco, Pedro C. Dotto, Renata P. Reis, André F. Weinert, Letícia S. Silveiro, Sandra P. Vendramini, Marcio F. do Prado, Flaviene A. Abrahão, Giovanna C. P. de Almeida, Ana Gregória F. P. Tavares, Maria da G. Rodrigues Gonçalves, Wagner Rodrigo B. Santomauro Junior, Augusto C. Halpern, Bruno Jorge, Alexander A. L. Nery, Marcia Teles, Milena G. Mol Genet Genomic Med Original Articles BACKGROUND: Maturity‐onset diabetes of the young (MODY) is a form of monogenic diabetes with autosomal dominant inheritance. To date, mutations in 11 genes have been frequently associated with this phenotype. In Brazil, few cohorts have been screened for MODY, all using a candidate gene approach, with a high prevalence of undiagnosed cases (MODY‐X). METHODS: We conducted a next‐generation sequencing target panel (tNGS) study to investigate, for the first time, a Brazilian cohort of MODY patients with a negative prior genetic analysis. One hundred and two patients were selected, of which 26 had an initial clinical suspicion of MODY‐GCK and 76 were non‐GCK MODY. RESULTS: After excluding all benign and likely benign variants and variants of uncertain significance, we were able to assign a genetic cause for 12.7% (13/102) of the probands. Three rare MODY subtypes were identified (PDX1/NEUROD1/ABCC8), and eight variants had not been previously described/mapped in genomic databases. Important clinical findings were evidenced in some cases after genetic diagnosis, such as MODY‐PDX1/HNF1B. CONCLUSION: A multiloci genetic approach allowed the identification of rare MODY subtypes, reducing the large percentage of MODY‐X in Brazilian cases and contributing to a better clinical, therapeutic, and prognostic characterization of these rare phenotypes. John Wiley and Sons Inc. 2019-10-08 /pmc/articles/PMC6900361/ /pubmed/31595705 http://dx.doi.org/10.1002/mgg3.962 Text en © 2019 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Original Articles
de Santana, Lucas S.
Caetano, Lilian A.
Costa‐Riquetto, Aline D.
Franco, Pedro C.
Dotto, Renata P.
Reis, André F.
Weinert, Letícia S.
Silveiro, Sandra P.
Vendramini, Marcio F.
do Prado, Flaviene A.
Abrahão, Giovanna C. P.
de Almeida, Ana Gregória F. P.
Tavares, Maria da G. Rodrigues
Gonçalves, Wagner Rodrigo B.
Santomauro Junior, Augusto C.
Halpern, Bruno
Jorge, Alexander A. L.
Nery, Marcia
Teles, Milena G.
Targeted sequencing identifies novel variants in common and rare MODY genes
title Targeted sequencing identifies novel variants in common and rare MODY genes
title_full Targeted sequencing identifies novel variants in common and rare MODY genes
title_fullStr Targeted sequencing identifies novel variants in common and rare MODY genes
title_full_unstemmed Targeted sequencing identifies novel variants in common and rare MODY genes
title_short Targeted sequencing identifies novel variants in common and rare MODY genes
title_sort targeted sequencing identifies novel variants in common and rare mody genes
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6900361/
https://www.ncbi.nlm.nih.gov/pubmed/31595705
http://dx.doi.org/10.1002/mgg3.962
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