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Genome-wide identification and expression analysis of the 14-3-3 gene family in soybean (Glycine max)

In eukaryotes, proteins encoded by the 14-3-3 genes are ubiquitously involved in the plant growth and development. The 14-3-3 gene family has been identified in several plants. In the present study, we identified 22 GmGF14 genes in the soybean genomic data. On the basis of the evolutionary analysis,...

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Autores principales: Wang, Yongbin, Ling, Lei, Jiang, Zhenfeng, Tan, Weiwei, Liu, Zhaojun, Wu, Licheng, Zhao, Yuanling, Xia, Shanyong, Ma, Jun, Wang, Guangjin, Li, Wenbin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6901008/
https://www.ncbi.nlm.nih.gov/pubmed/31824753
http://dx.doi.org/10.7717/peerj.7950
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author Wang, Yongbin
Ling, Lei
Jiang, Zhenfeng
Tan, Weiwei
Liu, Zhaojun
Wu, Licheng
Zhao, Yuanling
Xia, Shanyong
Ma, Jun
Wang, Guangjin
Li, Wenbin
author_facet Wang, Yongbin
Ling, Lei
Jiang, Zhenfeng
Tan, Weiwei
Liu, Zhaojun
Wu, Licheng
Zhao, Yuanling
Xia, Shanyong
Ma, Jun
Wang, Guangjin
Li, Wenbin
author_sort Wang, Yongbin
collection PubMed
description In eukaryotes, proteins encoded by the 14-3-3 genes are ubiquitously involved in the plant growth and development. The 14-3-3 gene family has been identified in several plants. In the present study, we identified 22 GmGF14 genes in the soybean genomic data. On the basis of the evolutionary analysis, they were clustered into ε and non-ε groups. The GmGF14s of two groups were highly conserved in motifs and gene structures. RNA-seq analysis suggested that GmGF14 genes were the major regulator of soybean morphogenesis. Moreover, the expression level of most GmGF14s changed obviously in multiple stress responses (drought, salt and cold), suggesting that they have the abilities of responding to multiple stresses. Taken together, this study shows that soybean 14-3-3s participate in plant growth and can response to various environmental stresses. These results provide important information for further understanding of the functions of 14-3-3 genes in soybean.
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spelling pubmed-69010082019-12-10 Genome-wide identification and expression analysis of the 14-3-3 gene family in soybean (Glycine max) Wang, Yongbin Ling, Lei Jiang, Zhenfeng Tan, Weiwei Liu, Zhaojun Wu, Licheng Zhao, Yuanling Xia, Shanyong Ma, Jun Wang, Guangjin Li, Wenbin PeerJ Agricultural Science In eukaryotes, proteins encoded by the 14-3-3 genes are ubiquitously involved in the plant growth and development. The 14-3-3 gene family has been identified in several plants. In the present study, we identified 22 GmGF14 genes in the soybean genomic data. On the basis of the evolutionary analysis, they were clustered into ε and non-ε groups. The GmGF14s of two groups were highly conserved in motifs and gene structures. RNA-seq analysis suggested that GmGF14 genes were the major regulator of soybean morphogenesis. Moreover, the expression level of most GmGF14s changed obviously in multiple stress responses (drought, salt and cold), suggesting that they have the abilities of responding to multiple stresses. Taken together, this study shows that soybean 14-3-3s participate in plant growth and can response to various environmental stresses. These results provide important information for further understanding of the functions of 14-3-3 genes in soybean. PeerJ Inc. 2019-12-06 /pmc/articles/PMC6901008/ /pubmed/31824753 http://dx.doi.org/10.7717/peerj.7950 Text en ©2019 Wang et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Agricultural Science
Wang, Yongbin
Ling, Lei
Jiang, Zhenfeng
Tan, Weiwei
Liu, Zhaojun
Wu, Licheng
Zhao, Yuanling
Xia, Shanyong
Ma, Jun
Wang, Guangjin
Li, Wenbin
Genome-wide identification and expression analysis of the 14-3-3 gene family in soybean (Glycine max)
title Genome-wide identification and expression analysis of the 14-3-3 gene family in soybean (Glycine max)
title_full Genome-wide identification and expression analysis of the 14-3-3 gene family in soybean (Glycine max)
title_fullStr Genome-wide identification and expression analysis of the 14-3-3 gene family in soybean (Glycine max)
title_full_unstemmed Genome-wide identification and expression analysis of the 14-3-3 gene family in soybean (Glycine max)
title_short Genome-wide identification and expression analysis of the 14-3-3 gene family in soybean (Glycine max)
title_sort genome-wide identification and expression analysis of the 14-3-3 gene family in soybean (glycine max)
topic Agricultural Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6901008/
https://www.ncbi.nlm.nih.gov/pubmed/31824753
http://dx.doi.org/10.7717/peerj.7950
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