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Statistics of correlated percolation in a bacterial community

Signal propagation over long distances is a ubiquitous feature of multicellular communities, but cell-to-cell variability can cause propagation to be highly heterogeneous. Simple models of signal propagation in heterogenous media, such as percolation theory, can potentially provide a quantitative un...

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Autores principales: Zhai, Xiaoling, Larkin, Joseph W., Kikuchi, Kaito, Redford, Samuel E., Roy, Ushasi, Süel, Gürol M., Mugler, Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6907856/
https://www.ncbi.nlm.nih.gov/pubmed/31790383
http://dx.doi.org/10.1371/journal.pcbi.1007508
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author Zhai, Xiaoling
Larkin, Joseph W.
Kikuchi, Kaito
Redford, Samuel E.
Roy, Ushasi
Süel, Gürol M.
Mugler, Andrew
author_facet Zhai, Xiaoling
Larkin, Joseph W.
Kikuchi, Kaito
Redford, Samuel E.
Roy, Ushasi
Süel, Gürol M.
Mugler, Andrew
author_sort Zhai, Xiaoling
collection PubMed
description Signal propagation over long distances is a ubiquitous feature of multicellular communities, but cell-to-cell variability can cause propagation to be highly heterogeneous. Simple models of signal propagation in heterogenous media, such as percolation theory, can potentially provide a quantitative understanding of these processes, but it is unclear whether these simple models properly capture the complexities of multicellular systems. We recently discovered that in biofilms of the bacterium Bacillus subtilis, the propagation of an electrical signal is statistically consistent with percolation theory, and yet it is reasonable to suspect that key features of this system go beyond the simple assumptions of basic percolation theory. Indeed, we find here that the probability for a cell to signal is not independent from other cells as assumed in percolation theory, but instead is correlated with its nearby neighbors. We develop a mechanistic model, in which correlated signaling emerges from cell division, phenotypic inheritance, and cell displacement, that reproduces the experimentally observed correlations. We find that the correlations do not significantly affect the spatial statistics, which we rationalize using a renormalization argument. Moreover, the fraction of signaling cells is not constant in space, as assumed in percolation theory, but instead varies within and across biofilms. We find that this feature lowers the fraction of signaling cells at which one observes the characteristic power-law statistics of cluster sizes, consistent with our experimental results. We validate the model using a mutant biofilm whose signaling probability decays along the propagation direction. Our results reveal key statistical features of a correlated signaling process in a multicellular community. More broadly, our results identify extensions to percolation theory that do or do not alter its predictions and may be more appropriate for biological systems.
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spelling pubmed-69078562019-12-27 Statistics of correlated percolation in a bacterial community Zhai, Xiaoling Larkin, Joseph W. Kikuchi, Kaito Redford, Samuel E. Roy, Ushasi Süel, Gürol M. Mugler, Andrew PLoS Comput Biol Research Article Signal propagation over long distances is a ubiquitous feature of multicellular communities, but cell-to-cell variability can cause propagation to be highly heterogeneous. Simple models of signal propagation in heterogenous media, such as percolation theory, can potentially provide a quantitative understanding of these processes, but it is unclear whether these simple models properly capture the complexities of multicellular systems. We recently discovered that in biofilms of the bacterium Bacillus subtilis, the propagation of an electrical signal is statistically consistent with percolation theory, and yet it is reasonable to suspect that key features of this system go beyond the simple assumptions of basic percolation theory. Indeed, we find here that the probability for a cell to signal is not independent from other cells as assumed in percolation theory, but instead is correlated with its nearby neighbors. We develop a mechanistic model, in which correlated signaling emerges from cell division, phenotypic inheritance, and cell displacement, that reproduces the experimentally observed correlations. We find that the correlations do not significantly affect the spatial statistics, which we rationalize using a renormalization argument. Moreover, the fraction of signaling cells is not constant in space, as assumed in percolation theory, but instead varies within and across biofilms. We find that this feature lowers the fraction of signaling cells at which one observes the characteristic power-law statistics of cluster sizes, consistent with our experimental results. We validate the model using a mutant biofilm whose signaling probability decays along the propagation direction. Our results reveal key statistical features of a correlated signaling process in a multicellular community. More broadly, our results identify extensions to percolation theory that do or do not alter its predictions and may be more appropriate for biological systems. Public Library of Science 2019-12-02 /pmc/articles/PMC6907856/ /pubmed/31790383 http://dx.doi.org/10.1371/journal.pcbi.1007508 Text en © 2019 Zhai et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zhai, Xiaoling
Larkin, Joseph W.
Kikuchi, Kaito
Redford, Samuel E.
Roy, Ushasi
Süel, Gürol M.
Mugler, Andrew
Statistics of correlated percolation in a bacterial community
title Statistics of correlated percolation in a bacterial community
title_full Statistics of correlated percolation in a bacterial community
title_fullStr Statistics of correlated percolation in a bacterial community
title_full_unstemmed Statistics of correlated percolation in a bacterial community
title_short Statistics of correlated percolation in a bacterial community
title_sort statistics of correlated percolation in a bacterial community
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6907856/
https://www.ncbi.nlm.nih.gov/pubmed/31790383
http://dx.doi.org/10.1371/journal.pcbi.1007508
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