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The effect of inhibition on rate code efficiency indicators

In this paper we investigate the rate coding capabilities of neurons whose input signal are alterations of the base state of balanced inhibitory and excitatory synaptic currents. We consider different regimes of excitation-inhibition relationship and an established conductance-based leaky integrator...

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Detalles Bibliográficos
Autores principales: Barta, Tomas, Kostal, Lubomir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6907877/
https://www.ncbi.nlm.nih.gov/pubmed/31790384
http://dx.doi.org/10.1371/journal.pcbi.1007545
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author Barta, Tomas
Kostal, Lubomir
author_facet Barta, Tomas
Kostal, Lubomir
author_sort Barta, Tomas
collection PubMed
description In this paper we investigate the rate coding capabilities of neurons whose input signal are alterations of the base state of balanced inhibitory and excitatory synaptic currents. We consider different regimes of excitation-inhibition relationship and an established conductance-based leaky integrator model with adaptive threshold and parameter sets recreating biologically relevant spiking regimes. We find that given mean post-synaptic firing rate, counter-intuitively, increased ratio of inhibition to excitation generally leads to higher signal to noise ratio (SNR). On the other hand, the inhibitory input significantly reduces the dynamic coding range of the neuron. We quantify the joint effect of SNR and dynamic coding range by computing the metabolic efficiency—the maximal amount of information per one ATP molecule expended (in bits/ATP). Moreover, by calculating the metabolic efficiency we are able to predict the shapes of the post-synaptic firing rate histograms that may be tested on experimental data. Likewise, optimal stimulus input distributions are predicted, however, we show that the optimum can essentially be reached with a broad range of input distributions. Finally, we examine which parameters of the used neuronal model are the most important for the metabolically efficient information transfer.
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spelling pubmed-69078772019-12-27 The effect of inhibition on rate code efficiency indicators Barta, Tomas Kostal, Lubomir PLoS Comput Biol Research Article In this paper we investigate the rate coding capabilities of neurons whose input signal are alterations of the base state of balanced inhibitory and excitatory synaptic currents. We consider different regimes of excitation-inhibition relationship and an established conductance-based leaky integrator model with adaptive threshold and parameter sets recreating biologically relevant spiking regimes. We find that given mean post-synaptic firing rate, counter-intuitively, increased ratio of inhibition to excitation generally leads to higher signal to noise ratio (SNR). On the other hand, the inhibitory input significantly reduces the dynamic coding range of the neuron. We quantify the joint effect of SNR and dynamic coding range by computing the metabolic efficiency—the maximal amount of information per one ATP molecule expended (in bits/ATP). Moreover, by calculating the metabolic efficiency we are able to predict the shapes of the post-synaptic firing rate histograms that may be tested on experimental data. Likewise, optimal stimulus input distributions are predicted, however, we show that the optimum can essentially be reached with a broad range of input distributions. Finally, we examine which parameters of the used neuronal model are the most important for the metabolically efficient information transfer. Public Library of Science 2019-12-02 /pmc/articles/PMC6907877/ /pubmed/31790384 http://dx.doi.org/10.1371/journal.pcbi.1007545 Text en © 2019 Barta, Kostal http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Barta, Tomas
Kostal, Lubomir
The effect of inhibition on rate code efficiency indicators
title The effect of inhibition on rate code efficiency indicators
title_full The effect of inhibition on rate code efficiency indicators
title_fullStr The effect of inhibition on rate code efficiency indicators
title_full_unstemmed The effect of inhibition on rate code efficiency indicators
title_short The effect of inhibition on rate code efficiency indicators
title_sort effect of inhibition on rate code efficiency indicators
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6907877/
https://www.ncbi.nlm.nih.gov/pubmed/31790384
http://dx.doi.org/10.1371/journal.pcbi.1007545
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