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The effect of inhibition on rate code efficiency indicators
In this paper we investigate the rate coding capabilities of neurons whose input signal are alterations of the base state of balanced inhibitory and excitatory synaptic currents. We consider different regimes of excitation-inhibition relationship and an established conductance-based leaky integrator...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6907877/ https://www.ncbi.nlm.nih.gov/pubmed/31790384 http://dx.doi.org/10.1371/journal.pcbi.1007545 |
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author | Barta, Tomas Kostal, Lubomir |
author_facet | Barta, Tomas Kostal, Lubomir |
author_sort | Barta, Tomas |
collection | PubMed |
description | In this paper we investigate the rate coding capabilities of neurons whose input signal are alterations of the base state of balanced inhibitory and excitatory synaptic currents. We consider different regimes of excitation-inhibition relationship and an established conductance-based leaky integrator model with adaptive threshold and parameter sets recreating biologically relevant spiking regimes. We find that given mean post-synaptic firing rate, counter-intuitively, increased ratio of inhibition to excitation generally leads to higher signal to noise ratio (SNR). On the other hand, the inhibitory input significantly reduces the dynamic coding range of the neuron. We quantify the joint effect of SNR and dynamic coding range by computing the metabolic efficiency—the maximal amount of information per one ATP molecule expended (in bits/ATP). Moreover, by calculating the metabolic efficiency we are able to predict the shapes of the post-synaptic firing rate histograms that may be tested on experimental data. Likewise, optimal stimulus input distributions are predicted, however, we show that the optimum can essentially be reached with a broad range of input distributions. Finally, we examine which parameters of the used neuronal model are the most important for the metabolically efficient information transfer. |
format | Online Article Text |
id | pubmed-6907877 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-69078772019-12-27 The effect of inhibition on rate code efficiency indicators Barta, Tomas Kostal, Lubomir PLoS Comput Biol Research Article In this paper we investigate the rate coding capabilities of neurons whose input signal are alterations of the base state of balanced inhibitory and excitatory synaptic currents. We consider different regimes of excitation-inhibition relationship and an established conductance-based leaky integrator model with adaptive threshold and parameter sets recreating biologically relevant spiking regimes. We find that given mean post-synaptic firing rate, counter-intuitively, increased ratio of inhibition to excitation generally leads to higher signal to noise ratio (SNR). On the other hand, the inhibitory input significantly reduces the dynamic coding range of the neuron. We quantify the joint effect of SNR and dynamic coding range by computing the metabolic efficiency—the maximal amount of information per one ATP molecule expended (in bits/ATP). Moreover, by calculating the metabolic efficiency we are able to predict the shapes of the post-synaptic firing rate histograms that may be tested on experimental data. Likewise, optimal stimulus input distributions are predicted, however, we show that the optimum can essentially be reached with a broad range of input distributions. Finally, we examine which parameters of the used neuronal model are the most important for the metabolically efficient information transfer. Public Library of Science 2019-12-02 /pmc/articles/PMC6907877/ /pubmed/31790384 http://dx.doi.org/10.1371/journal.pcbi.1007545 Text en © 2019 Barta, Kostal http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Barta, Tomas Kostal, Lubomir The effect of inhibition on rate code efficiency indicators |
title | The effect of inhibition on rate code efficiency indicators |
title_full | The effect of inhibition on rate code efficiency indicators |
title_fullStr | The effect of inhibition on rate code efficiency indicators |
title_full_unstemmed | The effect of inhibition on rate code efficiency indicators |
title_short | The effect of inhibition on rate code efficiency indicators |
title_sort | effect of inhibition on rate code efficiency indicators |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6907877/ https://www.ncbi.nlm.nih.gov/pubmed/31790384 http://dx.doi.org/10.1371/journal.pcbi.1007545 |
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