Cargando…

Stable aerobic and anaerobic coexistence in anoxic marine zones

Mechanistic description of the transition from aerobic to anaerobic metabolism is necessary for diagnostic and predictive modeling of fixed nitrogen loss in anoxic marine zones (AMZs). In a metabolic model where diverse oxygen- and nitrogen-cycling microbial metabolisms are described by underlying r...

Descripción completa

Detalles Bibliográficos
Autores principales: Zakem, Emily J., Mahadevan, Amala, Lauderdale, Jonathan M., Follows, Michael J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6908664/
https://www.ncbi.nlm.nih.gov/pubmed/31624350
http://dx.doi.org/10.1038/s41396-019-0523-8
_version_ 1783478789781585920
author Zakem, Emily J.
Mahadevan, Amala
Lauderdale, Jonathan M.
Follows, Michael J.
author_facet Zakem, Emily J.
Mahadevan, Amala
Lauderdale, Jonathan M.
Follows, Michael J.
author_sort Zakem, Emily J.
collection PubMed
description Mechanistic description of the transition from aerobic to anaerobic metabolism is necessary for diagnostic and predictive modeling of fixed nitrogen loss in anoxic marine zones (AMZs). In a metabolic model where diverse oxygen- and nitrogen-cycling microbial metabolisms are described by underlying redox chemical reactions, we predict a transition from strictly aerobic to predominantly anaerobic regimes as the outcome of ecological interactions along an oxygen gradient, obviating the need for prescribed critical oxygen concentrations. Competing aerobic and anaerobic metabolisms can coexist in anoxic conditions whether these metabolisms represent obligate or facultative populations. In the coexistence regime, relative rates of aerobic and anaerobic activity are determined by the ratio of oxygen to electron donor supply. The model simulates key characteristics of AMZs, such as the accumulation of nitrite and the sustainability of anammox at higher oxygen concentrations than denitrification, and articulates how microbial biomass concentrations relate to associated water column transformation rates as a function of redox stoichiometry and energetics. Incorporating the metabolic model into an idealized two-dimensional ocean circulation results in a simulated AMZ, in which a secondary chlorophyll maximum emerges from oxygen-limited grazing, and where vertical mixing and dispersal in the oxycline also contribute to metabolic co-occurrence. The modeling approach is mechanistic yet computationally economical and suitable for global change applications.
format Online
Article
Text
id pubmed-6908664
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-69086642019-12-13 Stable aerobic and anaerobic coexistence in anoxic marine zones Zakem, Emily J. Mahadevan, Amala Lauderdale, Jonathan M. Follows, Michael J. ISME J Article Mechanistic description of the transition from aerobic to anaerobic metabolism is necessary for diagnostic and predictive modeling of fixed nitrogen loss in anoxic marine zones (AMZs). In a metabolic model where diverse oxygen- and nitrogen-cycling microbial metabolisms are described by underlying redox chemical reactions, we predict a transition from strictly aerobic to predominantly anaerobic regimes as the outcome of ecological interactions along an oxygen gradient, obviating the need for prescribed critical oxygen concentrations. Competing aerobic and anaerobic metabolisms can coexist in anoxic conditions whether these metabolisms represent obligate or facultative populations. In the coexistence regime, relative rates of aerobic and anaerobic activity are determined by the ratio of oxygen to electron donor supply. The model simulates key characteristics of AMZs, such as the accumulation of nitrite and the sustainability of anammox at higher oxygen concentrations than denitrification, and articulates how microbial biomass concentrations relate to associated water column transformation rates as a function of redox stoichiometry and energetics. Incorporating the metabolic model into an idealized two-dimensional ocean circulation results in a simulated AMZ, in which a secondary chlorophyll maximum emerges from oxygen-limited grazing, and where vertical mixing and dispersal in the oxycline also contribute to metabolic co-occurrence. The modeling approach is mechanistic yet computationally economical and suitable for global change applications. Nature Publishing Group UK 2019-10-17 2020-01 /pmc/articles/PMC6908664/ /pubmed/31624350 http://dx.doi.org/10.1038/s41396-019-0523-8 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Zakem, Emily J.
Mahadevan, Amala
Lauderdale, Jonathan M.
Follows, Michael J.
Stable aerobic and anaerobic coexistence in anoxic marine zones
title Stable aerobic and anaerobic coexistence in anoxic marine zones
title_full Stable aerobic and anaerobic coexistence in anoxic marine zones
title_fullStr Stable aerobic and anaerobic coexistence in anoxic marine zones
title_full_unstemmed Stable aerobic and anaerobic coexistence in anoxic marine zones
title_short Stable aerobic and anaerobic coexistence in anoxic marine zones
title_sort stable aerobic and anaerobic coexistence in anoxic marine zones
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6908664/
https://www.ncbi.nlm.nih.gov/pubmed/31624350
http://dx.doi.org/10.1038/s41396-019-0523-8
work_keys_str_mv AT zakememilyj stableaerobicandanaerobiccoexistenceinanoxicmarinezones
AT mahadevanamala stableaerobicandanaerobiccoexistenceinanoxicmarinezones
AT lauderdalejonathanm stableaerobicandanaerobiccoexistenceinanoxicmarinezones
AT followsmichaelj stableaerobicandanaerobiccoexistenceinanoxicmarinezones