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Spatial genetic structure in Pinus cembroides Zucc. at population and landscape levels in central and northern Mexico
BACKGROUND: Spatial genetic structure (SGS) analysis is a powerful approach to quantifying gene flow between trees, thus clarifying the functional connectivity of trees at population and landscape scales. The findings of SGS analysis may be useful for conservation and management of natural populatio...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6910111/ https://www.ncbi.nlm.nih.gov/pubmed/31844562 http://dx.doi.org/10.7717/peerj.8002 |
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author | García-Zubia, Luis C. Hernández-Velasco, Javier Hernández-Díaz, José C. Simental-Rodríguez, Sergio L. López-Sánchez, Carlos A. Quiñones-Pérez, Carmen Z. Carrillo-Parra, Artemio Wehenkel, Christian |
author_facet | García-Zubia, Luis C. Hernández-Velasco, Javier Hernández-Díaz, José C. Simental-Rodríguez, Sergio L. López-Sánchez, Carlos A. Quiñones-Pérez, Carmen Z. Carrillo-Parra, Artemio Wehenkel, Christian |
author_sort | García-Zubia, Luis C. |
collection | PubMed |
description | BACKGROUND: Spatial genetic structure (SGS) analysis is a powerful approach to quantifying gene flow between trees, thus clarifying the functional connectivity of trees at population and landscape scales. The findings of SGS analysis may be useful for conservation and management of natural populations and plantations. Pinus cembroides is a widely distributed tree species, covering an area of about 2.5 million hectares in Mexico. The aim of this study was to examine five natural seed stands of P. cembroides in the Sierra Madre Occidental to determine the SGS at population (within the seed stand) and landscape (among seed stands) levels in order to establish guidelines for the conservation and management of the species. We hypothesized that P. cembroides, in which the seeds are dispersed by birds and mammals, creates weaker SGS than species with wind-dispersed seeds. METHODS: DNA fingerprinting was performed using the amplified fragment length polymorphism (AFLP) technique. In order to estimate the SGS at population and landscape levels, we measured the geographical (spatial) distance as the Euclidean distance. We also estimated the genetic distances between individuals using the pairwise kinship coefficient. RESULTS: The results showed non-significant autocorrelation in four out of five seed stands studied (i.e., a mainly random distribution in the space of the genetic variants of P. cembroides at population level). DISCUSSION: SGS was detected at the landscape scale, supporting the theory of isolation by distance as a consequence of restricted pollen and seed dispersal. However, the SGS may also have been generated by our sampling strategy. We recommended establishing a close network of seed stands of P. cembroides to prevent greater loss of local genetic variants and alteration of SGS. We recommend seed stands of P. cembroides of a minimum width of 225 m. |
format | Online Article Text |
id | pubmed-6910111 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-69101112019-12-16 Spatial genetic structure in Pinus cembroides Zucc. at population and landscape levels in central and northern Mexico García-Zubia, Luis C. Hernández-Velasco, Javier Hernández-Díaz, José C. Simental-Rodríguez, Sergio L. López-Sánchez, Carlos A. Quiñones-Pérez, Carmen Z. Carrillo-Parra, Artemio Wehenkel, Christian PeerJ Agricultural Science BACKGROUND: Spatial genetic structure (SGS) analysis is a powerful approach to quantifying gene flow between trees, thus clarifying the functional connectivity of trees at population and landscape scales. The findings of SGS analysis may be useful for conservation and management of natural populations and plantations. Pinus cembroides is a widely distributed tree species, covering an area of about 2.5 million hectares in Mexico. The aim of this study was to examine five natural seed stands of P. cembroides in the Sierra Madre Occidental to determine the SGS at population (within the seed stand) and landscape (among seed stands) levels in order to establish guidelines for the conservation and management of the species. We hypothesized that P. cembroides, in which the seeds are dispersed by birds and mammals, creates weaker SGS than species with wind-dispersed seeds. METHODS: DNA fingerprinting was performed using the amplified fragment length polymorphism (AFLP) technique. In order to estimate the SGS at population and landscape levels, we measured the geographical (spatial) distance as the Euclidean distance. We also estimated the genetic distances between individuals using the pairwise kinship coefficient. RESULTS: The results showed non-significant autocorrelation in four out of five seed stands studied (i.e., a mainly random distribution in the space of the genetic variants of P. cembroides at population level). DISCUSSION: SGS was detected at the landscape scale, supporting the theory of isolation by distance as a consequence of restricted pollen and seed dispersal. However, the SGS may also have been generated by our sampling strategy. We recommended establishing a close network of seed stands of P. cembroides to prevent greater loss of local genetic variants and alteration of SGS. We recommend seed stands of P. cembroides of a minimum width of 225 m. PeerJ Inc. 2019-11-06 /pmc/articles/PMC6910111/ /pubmed/31844562 http://dx.doi.org/10.7717/peerj.8002 Text en ©2019 García-Zubia et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Agricultural Science García-Zubia, Luis C. Hernández-Velasco, Javier Hernández-Díaz, José C. Simental-Rodríguez, Sergio L. López-Sánchez, Carlos A. Quiñones-Pérez, Carmen Z. Carrillo-Parra, Artemio Wehenkel, Christian Spatial genetic structure in Pinus cembroides Zucc. at population and landscape levels in central and northern Mexico |
title | Spatial genetic structure in Pinus cembroides Zucc. at population and landscape levels in central and northern Mexico |
title_full | Spatial genetic structure in Pinus cembroides Zucc. at population and landscape levels in central and northern Mexico |
title_fullStr | Spatial genetic structure in Pinus cembroides Zucc. at population and landscape levels in central and northern Mexico |
title_full_unstemmed | Spatial genetic structure in Pinus cembroides Zucc. at population and landscape levels in central and northern Mexico |
title_short | Spatial genetic structure in Pinus cembroides Zucc. at population and landscape levels in central and northern Mexico |
title_sort | spatial genetic structure in pinus cembroides zucc. at population and landscape levels in central and northern mexico |
topic | Agricultural Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6910111/ https://www.ncbi.nlm.nih.gov/pubmed/31844562 http://dx.doi.org/10.7717/peerj.8002 |
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