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Oral Microbiome in Patients with Oesophageal Squamous Cell Carcinoma
To investigate the oral microflora of patients with oesophageal squamous cell carcinoma (ESCC), saliva samples were collected from 20 patients with ESCC and 21 healthy controls. The V3-V4 region of 16S rDNA was amplified and sequenced by the Illumina MiSeq high-throughput sequencing platform. The fi...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6910992/ https://www.ncbi.nlm.nih.gov/pubmed/31836795 http://dx.doi.org/10.1038/s41598-019-55667-w |
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author | Wang, Qian Rao, Yuting Guo, Xiaobing Liu, Na Liu, Shuxiu Wen, Peipei Li, Shuang Li, Yuan |
author_facet | Wang, Qian Rao, Yuting Guo, Xiaobing Liu, Na Liu, Shuxiu Wen, Peipei Li, Shuang Li, Yuan |
author_sort | Wang, Qian |
collection | PubMed |
description | To investigate the oral microflora of patients with oesophageal squamous cell carcinoma (ESCC), saliva samples were collected from 20 patients with ESCC and 21 healthy controls. The V3-V4 region of 16S rDNA was amplified and sequenced by the Illumina MiSeq high-throughput sequencing platform. The final sequences were used for OTU analysis. Alpha and beta diversity analysis showed that the bacterial diversity and richness of the ESCC group were lower than those of the control group, while the variability of the ESCC group was higher than that of the control group. According to the Metastats difference analysis and LEfSe analysis, the high risk of ESCC may be related to Actinomyces and Atopobium, while the healthy control group is closely related to Fusobacterium and Porphyromonas (the analysis was performed at the genus level). The establishment of the relationship between oral microbiota and risk of ESCC may lead to significant advances in understanding the aetiology of cancer and may open a new research paradigm for cancer prevention. |
format | Online Article Text |
id | pubmed-6910992 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-69109922019-12-16 Oral Microbiome in Patients with Oesophageal Squamous Cell Carcinoma Wang, Qian Rao, Yuting Guo, Xiaobing Liu, Na Liu, Shuxiu Wen, Peipei Li, Shuang Li, Yuan Sci Rep Article To investigate the oral microflora of patients with oesophageal squamous cell carcinoma (ESCC), saliva samples were collected from 20 patients with ESCC and 21 healthy controls. The V3-V4 region of 16S rDNA was amplified and sequenced by the Illumina MiSeq high-throughput sequencing platform. The final sequences were used for OTU analysis. Alpha and beta diversity analysis showed that the bacterial diversity and richness of the ESCC group were lower than those of the control group, while the variability of the ESCC group was higher than that of the control group. According to the Metastats difference analysis and LEfSe analysis, the high risk of ESCC may be related to Actinomyces and Atopobium, while the healthy control group is closely related to Fusobacterium and Porphyromonas (the analysis was performed at the genus level). The establishment of the relationship between oral microbiota and risk of ESCC may lead to significant advances in understanding the aetiology of cancer and may open a new research paradigm for cancer prevention. Nature Publishing Group UK 2019-12-13 /pmc/articles/PMC6910992/ /pubmed/31836795 http://dx.doi.org/10.1038/s41598-019-55667-w Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Wang, Qian Rao, Yuting Guo, Xiaobing Liu, Na Liu, Shuxiu Wen, Peipei Li, Shuang Li, Yuan Oral Microbiome in Patients with Oesophageal Squamous Cell Carcinoma |
title | Oral Microbiome in Patients with Oesophageal Squamous Cell Carcinoma |
title_full | Oral Microbiome in Patients with Oesophageal Squamous Cell Carcinoma |
title_fullStr | Oral Microbiome in Patients with Oesophageal Squamous Cell Carcinoma |
title_full_unstemmed | Oral Microbiome in Patients with Oesophageal Squamous Cell Carcinoma |
title_short | Oral Microbiome in Patients with Oesophageal Squamous Cell Carcinoma |
title_sort | oral microbiome in patients with oesophageal squamous cell carcinoma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6910992/ https://www.ncbi.nlm.nih.gov/pubmed/31836795 http://dx.doi.org/10.1038/s41598-019-55667-w |
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