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Mesophotic.org: a repository for scientific information on mesophotic ecosystems

Mesophotic coral ecosystems (MCEs) and temperate mesophotic ecosystems (TMEs) occur at depths of roughly 30–150 m depth and are characterized by the presence of photosynthetic organisms despite reduced light availability. Exploration of these ecosystems dates back several decades, but our knowledge...

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Autores principales: Bongaerts, Pim, Perez-Rosales, Gonzalo, Radice, Veronica Z, Eyal, Gal, Gori, Andrea, Gress, Erika, Hammerman, Nicholas M, Hernandez-Agreda, Alejandra, Laverick, Jack, Muir, Paul, Pinheiro, Hudson, Pyle, Richard L, Rocha, Luiz, Turner, Joseph A, Booker, Ryan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6911162/
https://www.ncbi.nlm.nih.gov/pubmed/31836897
http://dx.doi.org/10.1093/database/baz140
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author Bongaerts, Pim
Perez-Rosales, Gonzalo
Radice, Veronica Z
Eyal, Gal
Gori, Andrea
Gress, Erika
Hammerman, Nicholas M
Hernandez-Agreda, Alejandra
Laverick, Jack
Muir, Paul
Pinheiro, Hudson
Pyle, Richard L
Rocha, Luiz
Turner, Joseph A
Booker, Ryan
author_facet Bongaerts, Pim
Perez-Rosales, Gonzalo
Radice, Veronica Z
Eyal, Gal
Gori, Andrea
Gress, Erika
Hammerman, Nicholas M
Hernandez-Agreda, Alejandra
Laverick, Jack
Muir, Paul
Pinheiro, Hudson
Pyle, Richard L
Rocha, Luiz
Turner, Joseph A
Booker, Ryan
author_sort Bongaerts, Pim
collection PubMed
description Mesophotic coral ecosystems (MCEs) and temperate mesophotic ecosystems (TMEs) occur at depths of roughly 30–150 m depth and are characterized by the presence of photosynthetic organisms despite reduced light availability. Exploration of these ecosystems dates back several decades, but our knowledge remained extremely limited until about a decade ago, when a renewed interest resulted in the establishment of a rapidly growing research community. Here, we present the ‘mesophotic.org’ database, a comprehensive and curated repository of scientific literature on mesophotic ecosystems. Through both manually curated and automatically extracted metadata, the repository facilitates rapid retrieval of available information about particular topics (e.g. taxa or geographic regions), exploration of spatial/temporal trends in research and identification of knowledge gaps. The repository can be queried to comprehensively obtain available data to address large-scale questions and guide future research directions. Overall, the ‘mesophotic.org’ repository provides an independent and open-source platform for the ever-growing research community working on MCEs and TMEs to collate and expedite our understanding of the occurrence, composition and functioning of these ecosystems. Database URL: http://mesophotic.org/
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spelling pubmed-69111622019-12-18 Mesophotic.org: a repository for scientific information on mesophotic ecosystems Bongaerts, Pim Perez-Rosales, Gonzalo Radice, Veronica Z Eyal, Gal Gori, Andrea Gress, Erika Hammerman, Nicholas M Hernandez-Agreda, Alejandra Laverick, Jack Muir, Paul Pinheiro, Hudson Pyle, Richard L Rocha, Luiz Turner, Joseph A Booker, Ryan Database (Oxford) Original Article Mesophotic coral ecosystems (MCEs) and temperate mesophotic ecosystems (TMEs) occur at depths of roughly 30–150 m depth and are characterized by the presence of photosynthetic organisms despite reduced light availability. Exploration of these ecosystems dates back several decades, but our knowledge remained extremely limited until about a decade ago, when a renewed interest resulted in the establishment of a rapidly growing research community. Here, we present the ‘mesophotic.org’ database, a comprehensive and curated repository of scientific literature on mesophotic ecosystems. Through both manually curated and automatically extracted metadata, the repository facilitates rapid retrieval of available information about particular topics (e.g. taxa or geographic regions), exploration of spatial/temporal trends in research and identification of knowledge gaps. The repository can be queried to comprehensively obtain available data to address large-scale questions and guide future research directions. Overall, the ‘mesophotic.org’ repository provides an independent and open-source platform for the ever-growing research community working on MCEs and TMEs to collate and expedite our understanding of the occurrence, composition and functioning of these ecosystems. Database URL: http://mesophotic.org/ Oxford University Press 2019-12-14 /pmc/articles/PMC6911162/ /pubmed/31836897 http://dx.doi.org/10.1093/database/baz140 Text en © The Author(s) 2019. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Bongaerts, Pim
Perez-Rosales, Gonzalo
Radice, Veronica Z
Eyal, Gal
Gori, Andrea
Gress, Erika
Hammerman, Nicholas M
Hernandez-Agreda, Alejandra
Laverick, Jack
Muir, Paul
Pinheiro, Hudson
Pyle, Richard L
Rocha, Luiz
Turner, Joseph A
Booker, Ryan
Mesophotic.org: a repository for scientific information on mesophotic ecosystems
title Mesophotic.org: a repository for scientific information on mesophotic ecosystems
title_full Mesophotic.org: a repository for scientific information on mesophotic ecosystems
title_fullStr Mesophotic.org: a repository for scientific information on mesophotic ecosystems
title_full_unstemmed Mesophotic.org: a repository for scientific information on mesophotic ecosystems
title_short Mesophotic.org: a repository for scientific information on mesophotic ecosystems
title_sort mesophotic.org: a repository for scientific information on mesophotic ecosystems
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6911162/
https://www.ncbi.nlm.nih.gov/pubmed/31836897
http://dx.doi.org/10.1093/database/baz140
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