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Estimating correlations among demographic parameters in population models
Estimating correlations among demographic parameters is critical to understanding population dynamics and life‐history evolution, where correlations among parameters can inform our understanding of life‐history trade‐offs, result in effective applied conservation actions, and shed light on evolution...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6912887/ https://www.ncbi.nlm.nih.gov/pubmed/31871663 http://dx.doi.org/10.1002/ece3.5809 |
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author | Riecke, Thomas V. Sedinger, Benjamin S. Williams, Perry J. Leach, Alan G. Sedinger, James S. |
author_facet | Riecke, Thomas V. Sedinger, Benjamin S. Williams, Perry J. Leach, Alan G. Sedinger, James S. |
author_sort | Riecke, Thomas V. |
collection | PubMed |
description | Estimating correlations among demographic parameters is critical to understanding population dynamics and life‐history evolution, where correlations among parameters can inform our understanding of life‐history trade‐offs, result in effective applied conservation actions, and shed light on evolutionary ecology. The most common approaches rely on the multivariate normal distribution, and its conjugate inverse Wishart prior distribution. However, the inverse Wishart prior for the covariance matrix of multivariate normal distributions has a strong influence on posterior distributions. As an alternative to the inverse Wishart distribution, we individually parameterize the covariance matrix of a multivariate normal distribution to accurately estimate variances (σ (2)) of, and process correlations (ρ) between, demographic parameters. We evaluate this approach using simulated capture–mark–recapture data. We then use this method to examine process correlations between adult and juvenile survival of black brent geese marked on the Yukon–Kuskokwim River Delta, Alaska (1988–2014). Our parameterization consistently outperformed the conjugate inverse Wishart prior for simulated data, where the means of posterior distributions estimated using an inverse Wishart prior were substantially different from the values used to simulate the data. Brent adult and juvenile annual apparent survival rates were strongly positively correlated (ρ = 0.563, 95% CRI 0.181–0.823), suggesting that habitat conditions have significant effects on both adult and juvenile survival. We provide robust simulation tools, and our methods can readily be expanded for use in other capture–recapture or capture‐recovery frameworks. Further, our work reveals limits on the utility of these approaches when study duration or sample sizes are small. |
format | Online Article Text |
id | pubmed-6912887 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-69128872019-12-23 Estimating correlations among demographic parameters in population models Riecke, Thomas V. Sedinger, Benjamin S. Williams, Perry J. Leach, Alan G. Sedinger, James S. Ecol Evol Original Research Estimating correlations among demographic parameters is critical to understanding population dynamics and life‐history evolution, where correlations among parameters can inform our understanding of life‐history trade‐offs, result in effective applied conservation actions, and shed light on evolutionary ecology. The most common approaches rely on the multivariate normal distribution, and its conjugate inverse Wishart prior distribution. However, the inverse Wishart prior for the covariance matrix of multivariate normal distributions has a strong influence on posterior distributions. As an alternative to the inverse Wishart distribution, we individually parameterize the covariance matrix of a multivariate normal distribution to accurately estimate variances (σ (2)) of, and process correlations (ρ) between, demographic parameters. We evaluate this approach using simulated capture–mark–recapture data. We then use this method to examine process correlations between adult and juvenile survival of black brent geese marked on the Yukon–Kuskokwim River Delta, Alaska (1988–2014). Our parameterization consistently outperformed the conjugate inverse Wishart prior for simulated data, where the means of posterior distributions estimated using an inverse Wishart prior were substantially different from the values used to simulate the data. Brent adult and juvenile annual apparent survival rates were strongly positively correlated (ρ = 0.563, 95% CRI 0.181–0.823), suggesting that habitat conditions have significant effects on both adult and juvenile survival. We provide robust simulation tools, and our methods can readily be expanded for use in other capture–recapture or capture‐recovery frameworks. Further, our work reveals limits on the utility of these approaches when study duration or sample sizes are small. John Wiley and Sons Inc. 2019-11-21 /pmc/articles/PMC6912887/ /pubmed/31871663 http://dx.doi.org/10.1002/ece3.5809 Text en © 2019 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Riecke, Thomas V. Sedinger, Benjamin S. Williams, Perry J. Leach, Alan G. Sedinger, James S. Estimating correlations among demographic parameters in population models |
title | Estimating correlations among demographic parameters in population models |
title_full | Estimating correlations among demographic parameters in population models |
title_fullStr | Estimating correlations among demographic parameters in population models |
title_full_unstemmed | Estimating correlations among demographic parameters in population models |
title_short | Estimating correlations among demographic parameters in population models |
title_sort | estimating correlations among demographic parameters in population models |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6912887/ https://www.ncbi.nlm.nih.gov/pubmed/31871663 http://dx.doi.org/10.1002/ece3.5809 |
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