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Comparison of human population receptive field estimates between scanners and the effect of temporal filtering
Background: Population receptive field (pRF) analysis with functional magnetic resonance imaging (fMRI) is an increasingly popular method for mapping visual field representations and estimating the spatial selectivity of voxels in human visual cortex. However, the multitude of experimental setups an...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
F1000 Research Limited
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6913234/ https://www.ncbi.nlm.nih.gov/pubmed/31885863 http://dx.doi.org/10.12688/f1000research.20496.2 |
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author | Morgan, Catherine Schwarzkopf, D. Samuel |
author_facet | Morgan, Catherine Schwarzkopf, D. Samuel |
author_sort | Morgan, Catherine |
collection | PubMed |
description | Background: Population receptive field (pRF) analysis with functional magnetic resonance imaging (fMRI) is an increasingly popular method for mapping visual field representations and estimating the spatial selectivity of voxels in human visual cortex. However, the multitude of experimental setups and processing methods used makes comparisons of results between studies difficult. Methods: Here, we compared pRF maps acquired in the same three individuals using comparable scanning parameters on a 1.5 and a 3 Tesla scanner located in two different countries. We also tested the effect of low-pass filtering of the time series on pRF estimates. Results: As expected, the signal-to-noise ratio for the 3 Tesla data was superior; critically, however, estimates of pRF size and cortical magnification did not reveal any systematic differences between the sites. Unsurprisingly, low-pass filtering enhanced goodness-of-fit, presumably by removing high-frequency noise. However, there was no substantial increase in the number of voxels containing meaningful retinotopic signals after low-pass filtering. Importantly, filtering also increased estimates of pRF size in the early visual areas which could substantially skew interpretations of spatial tuning properties. Conclusion: Our results therefore suggest that pRF estimates are generally comparable between scanners of different field strengths, but temporal filtering should be used with caution. |
format | Online Article Text |
id | pubmed-6913234 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | F1000 Research Limited |
record_format | MEDLINE/PubMed |
spelling | pubmed-69132342019-12-27 Comparison of human population receptive field estimates between scanners and the effect of temporal filtering Morgan, Catherine Schwarzkopf, D. Samuel F1000Res Research Article Background: Population receptive field (pRF) analysis with functional magnetic resonance imaging (fMRI) is an increasingly popular method for mapping visual field representations and estimating the spatial selectivity of voxels in human visual cortex. However, the multitude of experimental setups and processing methods used makes comparisons of results between studies difficult. Methods: Here, we compared pRF maps acquired in the same three individuals using comparable scanning parameters on a 1.5 and a 3 Tesla scanner located in two different countries. We also tested the effect of low-pass filtering of the time series on pRF estimates. Results: As expected, the signal-to-noise ratio for the 3 Tesla data was superior; critically, however, estimates of pRF size and cortical magnification did not reveal any systematic differences between the sites. Unsurprisingly, low-pass filtering enhanced goodness-of-fit, presumably by removing high-frequency noise. However, there was no substantial increase in the number of voxels containing meaningful retinotopic signals after low-pass filtering. Importantly, filtering also increased estimates of pRF size in the early visual areas which could substantially skew interpretations of spatial tuning properties. Conclusion: Our results therefore suggest that pRF estimates are generally comparable between scanners of different field strengths, but temporal filtering should be used with caution. F1000 Research Limited 2020-02-26 /pmc/articles/PMC6913234/ /pubmed/31885863 http://dx.doi.org/10.12688/f1000research.20496.2 Text en Copyright: © 2020 Morgan C and Schwarzkopf DS http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Morgan, Catherine Schwarzkopf, D. Samuel Comparison of human population receptive field estimates between scanners and the effect of temporal filtering |
title | Comparison of human population receptive field estimates between scanners and the effect of temporal filtering |
title_full | Comparison of human population receptive field estimates between scanners and the effect of temporal filtering |
title_fullStr | Comparison of human population receptive field estimates between scanners and the effect of temporal filtering |
title_full_unstemmed | Comparison of human population receptive field estimates between scanners and the effect of temporal filtering |
title_short | Comparison of human population receptive field estimates between scanners and the effect of temporal filtering |
title_sort | comparison of human population receptive field estimates between scanners and the effect of temporal filtering |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6913234/ https://www.ncbi.nlm.nih.gov/pubmed/31885863 http://dx.doi.org/10.12688/f1000research.20496.2 |
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