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Using Low-Dimensional Manifolds to Map Relationships Between Dynamic Brain Networks
As the field of dynamic brain networks continues to expand, new methods are needed to allow for optimal handling and understanding of this explosion in data. We propose here a novel approach that embeds dynamic brain networks onto a two-dimensional (2D) manifold based on similarities and differences...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6914694/ https://www.ncbi.nlm.nih.gov/pubmed/31920590 http://dx.doi.org/10.3389/fnhum.2019.00430 |
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author | Bahrami, Mohsen Lyday, Robert G. Casanova, Ramon Burdette, Jonathan H. Simpson, Sean L. Laurienti, Paul J. |
author_facet | Bahrami, Mohsen Lyday, Robert G. Casanova, Ramon Burdette, Jonathan H. Simpson, Sean L. Laurienti, Paul J. |
author_sort | Bahrami, Mohsen |
collection | PubMed |
description | As the field of dynamic brain networks continues to expand, new methods are needed to allow for optimal handling and understanding of this explosion in data. We propose here a novel approach that embeds dynamic brain networks onto a two-dimensional (2D) manifold based on similarities and differences in network organization. Each brain network is represented as a single point on the low dimensional manifold with networks of similar topology being located in close proximity. The rich spatio-temporal information has great potential for visualization, analysis, and interpretation of dynamic brain networks. The fact that each network is represented by a single point makes it possible to switch between the low-dimensional space and the full connectivity of any given brain network. Thus, networks in a specific region of the low-dimensional space can be examined to identify network features, such as the location of brain network hubs or the interconnectivity between brain circuits. In this proof-of-concept manuscript, we show that these low dimensional manifolds contain meaningful information, as they were able to successfully discriminate between cognitive tasks and study populations. This work provides evidence that embedding dynamic brain networks onto low dimensional manifolds has the potential to help us better visualize and understand dynamic brain networks with the hope of gaining a deeper understanding of normal and abnormal brain dynamics. |
format | Online Article Text |
id | pubmed-6914694 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-69146942020-01-09 Using Low-Dimensional Manifolds to Map Relationships Between Dynamic Brain Networks Bahrami, Mohsen Lyday, Robert G. Casanova, Ramon Burdette, Jonathan H. Simpson, Sean L. Laurienti, Paul J. Front Hum Neurosci Human Neuroscience As the field of dynamic brain networks continues to expand, new methods are needed to allow for optimal handling and understanding of this explosion in data. We propose here a novel approach that embeds dynamic brain networks onto a two-dimensional (2D) manifold based on similarities and differences in network organization. Each brain network is represented as a single point on the low dimensional manifold with networks of similar topology being located in close proximity. The rich spatio-temporal information has great potential for visualization, analysis, and interpretation of dynamic brain networks. The fact that each network is represented by a single point makes it possible to switch between the low-dimensional space and the full connectivity of any given brain network. Thus, networks in a specific region of the low-dimensional space can be examined to identify network features, such as the location of brain network hubs or the interconnectivity between brain circuits. In this proof-of-concept manuscript, we show that these low dimensional manifolds contain meaningful information, as they were able to successfully discriminate between cognitive tasks and study populations. This work provides evidence that embedding dynamic brain networks onto low dimensional manifolds has the potential to help us better visualize and understand dynamic brain networks with the hope of gaining a deeper understanding of normal and abnormal brain dynamics. Frontiers Media S.A. 2019-12-10 /pmc/articles/PMC6914694/ /pubmed/31920590 http://dx.doi.org/10.3389/fnhum.2019.00430 Text en Copyright © 2019 Bahrami, Lyday, Casanova, Burdette, Simpson and Laurienti. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Human Neuroscience Bahrami, Mohsen Lyday, Robert G. Casanova, Ramon Burdette, Jonathan H. Simpson, Sean L. Laurienti, Paul J. Using Low-Dimensional Manifolds to Map Relationships Between Dynamic Brain Networks |
title | Using Low-Dimensional Manifolds to Map Relationships Between Dynamic Brain Networks |
title_full | Using Low-Dimensional Manifolds to Map Relationships Between Dynamic Brain Networks |
title_fullStr | Using Low-Dimensional Manifolds to Map Relationships Between Dynamic Brain Networks |
title_full_unstemmed | Using Low-Dimensional Manifolds to Map Relationships Between Dynamic Brain Networks |
title_short | Using Low-Dimensional Manifolds to Map Relationships Between Dynamic Brain Networks |
title_sort | using low-dimensional manifolds to map relationships between dynamic brain networks |
topic | Human Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6914694/ https://www.ncbi.nlm.nih.gov/pubmed/31920590 http://dx.doi.org/10.3389/fnhum.2019.00430 |
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