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Single-Cell RNA Sequencing of the Cardiovascular System: New Looks for Old Diseases

Cardiovascular disease encompasses a wide range of conditions, resulting in the highest number of deaths worldwide. The underlying pathologies surrounding cardiovascular disease include a vast and complicated network of both cellular and molecular mechanisms. Unique phenotypic alterations in specifi...

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Autores principales: Chaudhry, Farhan, Isherwood, Jenna, Bawa, Tejeshwar, Patel, Dhruvil, Gurdziel, Katherine, Lanfear, David E., Ruden, Douglas M., Levy, Phillip D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6914766/
https://www.ncbi.nlm.nih.gov/pubmed/31921894
http://dx.doi.org/10.3389/fcvm.2019.00173
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author Chaudhry, Farhan
Isherwood, Jenna
Bawa, Tejeshwar
Patel, Dhruvil
Gurdziel, Katherine
Lanfear, David E.
Ruden, Douglas M.
Levy, Phillip D.
author_facet Chaudhry, Farhan
Isherwood, Jenna
Bawa, Tejeshwar
Patel, Dhruvil
Gurdziel, Katherine
Lanfear, David E.
Ruden, Douglas M.
Levy, Phillip D.
author_sort Chaudhry, Farhan
collection PubMed
description Cardiovascular disease encompasses a wide range of conditions, resulting in the highest number of deaths worldwide. The underlying pathologies surrounding cardiovascular disease include a vast and complicated network of both cellular and molecular mechanisms. Unique phenotypic alterations in specific cell types, visualized as varying RNA expression-levels (both coding and non-coding), have been identified as crucial factors in the pathology underlying conditions such as heart failure and atherosclerosis. Recent advances in single-cell RNA sequencing (scRNA-seq) have elucidated a new realm of cell subpopulations and transcriptional variations that are associated with normal and pathological physiology in a wide variety of diseases. This breakthrough in the phenotypical understanding of our cells has brought novel insight into cardiovascular basic science. scRNA-seq allows for separation of widely distinct cell subpopulations which were, until recently, simply averaged together with bulk-tissue RNA-seq. scRNA-seq has been used to identify novel cell types in the heart and vasculature that could be implicated in a variety of disease pathologies. Furthermore, scRNA-seq has been able to identify significant heterogeneity of phenotypes within individual cell subtype populations. The ability to characterize single cells based on transcriptional phenotypes allows researchers the ability to map development of cells and identify changes in specific subpopulations due to diseases at a very high throughput. This review looks at recent scRNA-seq studies of various aspects of the cardiovascular system and discusses their potential value to our understanding of the cardiovascular system and pathology.
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spelling pubmed-69147662020-01-09 Single-Cell RNA Sequencing of the Cardiovascular System: New Looks for Old Diseases Chaudhry, Farhan Isherwood, Jenna Bawa, Tejeshwar Patel, Dhruvil Gurdziel, Katherine Lanfear, David E. Ruden, Douglas M. Levy, Phillip D. Front Cardiovasc Med Cardiovascular Medicine Cardiovascular disease encompasses a wide range of conditions, resulting in the highest number of deaths worldwide. The underlying pathologies surrounding cardiovascular disease include a vast and complicated network of both cellular and molecular mechanisms. Unique phenotypic alterations in specific cell types, visualized as varying RNA expression-levels (both coding and non-coding), have been identified as crucial factors in the pathology underlying conditions such as heart failure and atherosclerosis. Recent advances in single-cell RNA sequencing (scRNA-seq) have elucidated a new realm of cell subpopulations and transcriptional variations that are associated with normal and pathological physiology in a wide variety of diseases. This breakthrough in the phenotypical understanding of our cells has brought novel insight into cardiovascular basic science. scRNA-seq allows for separation of widely distinct cell subpopulations which were, until recently, simply averaged together with bulk-tissue RNA-seq. scRNA-seq has been used to identify novel cell types in the heart and vasculature that could be implicated in a variety of disease pathologies. Furthermore, scRNA-seq has been able to identify significant heterogeneity of phenotypes within individual cell subtype populations. The ability to characterize single cells based on transcriptional phenotypes allows researchers the ability to map development of cells and identify changes in specific subpopulations due to diseases at a very high throughput. This review looks at recent scRNA-seq studies of various aspects of the cardiovascular system and discusses their potential value to our understanding of the cardiovascular system and pathology. Frontiers Media S.A. 2019-12-10 /pmc/articles/PMC6914766/ /pubmed/31921894 http://dx.doi.org/10.3389/fcvm.2019.00173 Text en Copyright © 2019 Chaudhry, Isherwood, Bawa, Patel, Gurdziel, Lanfear, Ruden and Levy. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cardiovascular Medicine
Chaudhry, Farhan
Isherwood, Jenna
Bawa, Tejeshwar
Patel, Dhruvil
Gurdziel, Katherine
Lanfear, David E.
Ruden, Douglas M.
Levy, Phillip D.
Single-Cell RNA Sequencing of the Cardiovascular System: New Looks for Old Diseases
title Single-Cell RNA Sequencing of the Cardiovascular System: New Looks for Old Diseases
title_full Single-Cell RNA Sequencing of the Cardiovascular System: New Looks for Old Diseases
title_fullStr Single-Cell RNA Sequencing of the Cardiovascular System: New Looks for Old Diseases
title_full_unstemmed Single-Cell RNA Sequencing of the Cardiovascular System: New Looks for Old Diseases
title_short Single-Cell RNA Sequencing of the Cardiovascular System: New Looks for Old Diseases
title_sort single-cell rna sequencing of the cardiovascular system: new looks for old diseases
topic Cardiovascular Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6914766/
https://www.ncbi.nlm.nih.gov/pubmed/31921894
http://dx.doi.org/10.3389/fcvm.2019.00173
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