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Clinical method evaluation of hemoglobin S and C identification by top-down selected reaction monitoring and electron transfer dissociation
BACKGROUND: Biological diagnosis of hemoglobin disorders is a complex process relying on the combination of several analytical techniques to identify Hb variants in a particular sample. Currently, hematology laboratories usually use high-performance liquid chromatography (HPLC), capillary electropho...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6915975/ https://www.ncbi.nlm.nih.gov/pubmed/31889938 http://dx.doi.org/10.1186/s12014-019-9261-1 |
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author | Lassout, Olivier Hartmer, Ralf Jabs, Wolfgang Clerici, Lorella Tsybin, Yury O. Samii, Kaveh Vuilleumier, Nicolas Hochstrasser, Denis Scherl, Alexander Lescuyer, Pierre Coelho Graça, Didia |
author_facet | Lassout, Olivier Hartmer, Ralf Jabs, Wolfgang Clerici, Lorella Tsybin, Yury O. Samii, Kaveh Vuilleumier, Nicolas Hochstrasser, Denis Scherl, Alexander Lescuyer, Pierre Coelho Graça, Didia |
author_sort | Lassout, Olivier |
collection | PubMed |
description | BACKGROUND: Biological diagnosis of hemoglobin disorders is a complex process relying on the combination of several analytical techniques to identify Hb variants in a particular sample. Currently, hematology laboratories usually use high-performance liquid chromatography (HPLC), capillary electrophoresis and gel-based methods to characterize Hb variants. Co-elution and co-migration may represent major issues for precise identification of Hb variants, even for the most common ones such as Hb S and C. METHODS: We adapted a top-down selected reaction monitoring (SRM) electron transfer dissociation (ETD) mass spectrometry (MS) method to fit with a clinical laboratory environment. An automated analytical process with semi-automated data analysis compatible with a clinical practice was developed. A comparative study between a reference HPLC method and the MS assay was performed on 152 patient samples. RESULTS: The developed workflow allowed to identify with high specificity and selectivity the most common Hb variants (Hb S and Hb C). Concordance of the MS-based approach with HPLC was 71/71 (100%) for Hb S and 11/11 (100%) for Hb C. CONCLUSIONS: This top-down SRM ETD method can be used in a clinical environment to detect Hb S and Hb C. |
format | Online Article Text |
id | pubmed-6915975 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-69159752019-12-30 Clinical method evaluation of hemoglobin S and C identification by top-down selected reaction monitoring and electron transfer dissociation Lassout, Olivier Hartmer, Ralf Jabs, Wolfgang Clerici, Lorella Tsybin, Yury O. Samii, Kaveh Vuilleumier, Nicolas Hochstrasser, Denis Scherl, Alexander Lescuyer, Pierre Coelho Graça, Didia Clin Proteomics Research BACKGROUND: Biological diagnosis of hemoglobin disorders is a complex process relying on the combination of several analytical techniques to identify Hb variants in a particular sample. Currently, hematology laboratories usually use high-performance liquid chromatography (HPLC), capillary electrophoresis and gel-based methods to characterize Hb variants. Co-elution and co-migration may represent major issues for precise identification of Hb variants, even for the most common ones such as Hb S and C. METHODS: We adapted a top-down selected reaction monitoring (SRM) electron transfer dissociation (ETD) mass spectrometry (MS) method to fit with a clinical laboratory environment. An automated analytical process with semi-automated data analysis compatible with a clinical practice was developed. A comparative study between a reference HPLC method and the MS assay was performed on 152 patient samples. RESULTS: The developed workflow allowed to identify with high specificity and selectivity the most common Hb variants (Hb S and Hb C). Concordance of the MS-based approach with HPLC was 71/71 (100%) for Hb S and 11/11 (100%) for Hb C. CONCLUSIONS: This top-down SRM ETD method can be used in a clinical environment to detect Hb S and Hb C. BioMed Central 2019-12-17 /pmc/articles/PMC6915975/ /pubmed/31889938 http://dx.doi.org/10.1186/s12014-019-9261-1 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Lassout, Olivier Hartmer, Ralf Jabs, Wolfgang Clerici, Lorella Tsybin, Yury O. Samii, Kaveh Vuilleumier, Nicolas Hochstrasser, Denis Scherl, Alexander Lescuyer, Pierre Coelho Graça, Didia Clinical method evaluation of hemoglobin S and C identification by top-down selected reaction monitoring and electron transfer dissociation |
title | Clinical method evaluation of hemoglobin S and C identification by top-down selected reaction monitoring and electron transfer dissociation |
title_full | Clinical method evaluation of hemoglobin S and C identification by top-down selected reaction monitoring and electron transfer dissociation |
title_fullStr | Clinical method evaluation of hemoglobin S and C identification by top-down selected reaction monitoring and electron transfer dissociation |
title_full_unstemmed | Clinical method evaluation of hemoglobin S and C identification by top-down selected reaction monitoring and electron transfer dissociation |
title_short | Clinical method evaluation of hemoglobin S and C identification by top-down selected reaction monitoring and electron transfer dissociation |
title_sort | clinical method evaluation of hemoglobin s and c identification by top-down selected reaction monitoring and electron transfer dissociation |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6915975/ https://www.ncbi.nlm.nih.gov/pubmed/31889938 http://dx.doi.org/10.1186/s12014-019-9261-1 |
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