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Inferring disease severity in rheumatoid arthritis using predictive modeling in administrative claims databases
BACKGROUND: Confounding by disease severity is an issue in pharmacoepidemiology studies of rheumatoid arthritis (RA), due to channeling of sicker patients to certain therapies. To address the issue of limited clinical data for confounder adjustment, a patient-level prediction model to differentiate...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6919633/ https://www.ncbi.nlm.nih.gov/pubmed/31851711 http://dx.doi.org/10.1371/journal.pone.0226255 |
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author | Chandran, Urmila Reps, Jenna Stang, Paul E. Ryan, Patrick B. |
author_facet | Chandran, Urmila Reps, Jenna Stang, Paul E. Ryan, Patrick B. |
author_sort | Chandran, Urmila |
collection | PubMed |
description | BACKGROUND: Confounding by disease severity is an issue in pharmacoepidemiology studies of rheumatoid arthritis (RA), due to channeling of sicker patients to certain therapies. To address the issue of limited clinical data for confounder adjustment, a patient-level prediction model to differentiate between patients prescribed and not prescribed advanced therapies was developed as a surrogate for disease severity, using all available data from a US claims database. METHODS: Data from adult RA patients were used to build regularized logistic regression models to predict current and future disease severity using a biologic or tofacitinib prescription claim as a surrogate for moderate-to-severe disease. Model discrimination was assessed using the area under the receiver (AUC) operating characteristic curve, tested and trained in Optum Clinformatics(®) Extended DataMart (Optum) and additionally validated in three external IBM MarketScan(®) databases. The model was further validated in the Optum database across a range of patient cohorts. RESULTS: In the Optum database (n = 68,608), the AUC for discriminating RA patients with a prescription claim for a biologic or tofacitinib versus those without in the 90 days following index diagnosis was 0.80. Model AUCs were 0.77 in IBM CCAE (n = 75,579) and IBM MDCD (n = 7,537) and 0.75 in IBM MDCR (n = 36,090). There was little change in the prediction model assessing discrimination 730 days following index diagnosis (prediction model AUC in Optum was 0.79). CONCLUSIONS: A prediction model demonstrated good discrimination across multiple claims databases to identify RA patients with a prescription claim for advanced therapies during different time-at-risk periods as proxy for current and future moderate-to-severe disease. This work provides a robust model-derived risk score that can be used as a potential covariate and proxy measure to adjust for confounding by severity in multivariable models in the RA population. An R package to develop the prediction model and risk score are available in an open source platform for researchers. |
format | Online Article Text |
id | pubmed-6919633 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-69196332020-01-07 Inferring disease severity in rheumatoid arthritis using predictive modeling in administrative claims databases Chandran, Urmila Reps, Jenna Stang, Paul E. Ryan, Patrick B. PLoS One Research Article BACKGROUND: Confounding by disease severity is an issue in pharmacoepidemiology studies of rheumatoid arthritis (RA), due to channeling of sicker patients to certain therapies. To address the issue of limited clinical data for confounder adjustment, a patient-level prediction model to differentiate between patients prescribed and not prescribed advanced therapies was developed as a surrogate for disease severity, using all available data from a US claims database. METHODS: Data from adult RA patients were used to build regularized logistic regression models to predict current and future disease severity using a biologic or tofacitinib prescription claim as a surrogate for moderate-to-severe disease. Model discrimination was assessed using the area under the receiver (AUC) operating characteristic curve, tested and trained in Optum Clinformatics(®) Extended DataMart (Optum) and additionally validated in three external IBM MarketScan(®) databases. The model was further validated in the Optum database across a range of patient cohorts. RESULTS: In the Optum database (n = 68,608), the AUC for discriminating RA patients with a prescription claim for a biologic or tofacitinib versus those without in the 90 days following index diagnosis was 0.80. Model AUCs were 0.77 in IBM CCAE (n = 75,579) and IBM MDCD (n = 7,537) and 0.75 in IBM MDCR (n = 36,090). There was little change in the prediction model assessing discrimination 730 days following index diagnosis (prediction model AUC in Optum was 0.79). CONCLUSIONS: A prediction model demonstrated good discrimination across multiple claims databases to identify RA patients with a prescription claim for advanced therapies during different time-at-risk periods as proxy for current and future moderate-to-severe disease. This work provides a robust model-derived risk score that can be used as a potential covariate and proxy measure to adjust for confounding by severity in multivariable models in the RA population. An R package to develop the prediction model and risk score are available in an open source platform for researchers. Public Library of Science 2019-12-18 /pmc/articles/PMC6919633/ /pubmed/31851711 http://dx.doi.org/10.1371/journal.pone.0226255 Text en © 2019 Chandran et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Chandran, Urmila Reps, Jenna Stang, Paul E. Ryan, Patrick B. Inferring disease severity in rheumatoid arthritis using predictive modeling in administrative claims databases |
title | Inferring disease severity in rheumatoid arthritis using predictive modeling in administrative claims databases |
title_full | Inferring disease severity in rheumatoid arthritis using predictive modeling in administrative claims databases |
title_fullStr | Inferring disease severity in rheumatoid arthritis using predictive modeling in administrative claims databases |
title_full_unstemmed | Inferring disease severity in rheumatoid arthritis using predictive modeling in administrative claims databases |
title_short | Inferring disease severity in rheumatoid arthritis using predictive modeling in administrative claims databases |
title_sort | inferring disease severity in rheumatoid arthritis using predictive modeling in administrative claims databases |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6919633/ https://www.ncbi.nlm.nih.gov/pubmed/31851711 http://dx.doi.org/10.1371/journal.pone.0226255 |
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