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Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium Marinobacter sp. ELB17
Haloalkane dehalogenases are enzymes with a broad application potential in biocatalysis, bioremediation, biosensing and cell imaging. The new haloalkane dehalogenase DmxA originating from the psychrophilic bacterium Marinobacter sp. ELB17 surprisingly possesses the highest thermal stability (apparen...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6920932/ https://www.ncbi.nlm.nih.gov/pubmed/31661858 http://dx.doi.org/10.3390/microorganisms7110498 |
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author | Chrast, Lukas Tratsiak, Katsiaryna Planas-Iglesias, Joan Daniel, Lukas Prudnikova, Tatyana Brezovsky, Jan Bednar, David Kuta Smatanova, Ivana Chaloupkova, Radka Damborsky, Jiri |
author_facet | Chrast, Lukas Tratsiak, Katsiaryna Planas-Iglesias, Joan Daniel, Lukas Prudnikova, Tatyana Brezovsky, Jan Bednar, David Kuta Smatanova, Ivana Chaloupkova, Radka Damborsky, Jiri |
author_sort | Chrast, Lukas |
collection | PubMed |
description | Haloalkane dehalogenases are enzymes with a broad application potential in biocatalysis, bioremediation, biosensing and cell imaging. The new haloalkane dehalogenase DmxA originating from the psychrophilic bacterium Marinobacter sp. ELB17 surprisingly possesses the highest thermal stability (apparent melting temperature T(m,app) = 65.9 °C) of all biochemically characterized wild type haloalkane dehalogenases belonging to subfamily II. The enzyme was successfully expressed and its crystal structure was solved at 1.45 Å resolution. DmxA structure contains several features distinct from known members of haloalkane dehalogenase family: (i) a unique composition of catalytic residues; (ii) a dimeric state mediated by a disulfide bridge; and (iii) narrow tunnels connecting the enzyme active site with the surrounding solvent. The importance of narrow tunnels in such paradoxically high stability of DmxA enzyme was confirmed by computational protein design and mutagenesis experiments. |
format | Online Article Text |
id | pubmed-6920932 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-69209322019-12-24 Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium Marinobacter sp. ELB17 Chrast, Lukas Tratsiak, Katsiaryna Planas-Iglesias, Joan Daniel, Lukas Prudnikova, Tatyana Brezovsky, Jan Bednar, David Kuta Smatanova, Ivana Chaloupkova, Radka Damborsky, Jiri Microorganisms Article Haloalkane dehalogenases are enzymes with a broad application potential in biocatalysis, bioremediation, biosensing and cell imaging. The new haloalkane dehalogenase DmxA originating from the psychrophilic bacterium Marinobacter sp. ELB17 surprisingly possesses the highest thermal stability (apparent melting temperature T(m,app) = 65.9 °C) of all biochemically characterized wild type haloalkane dehalogenases belonging to subfamily II. The enzyme was successfully expressed and its crystal structure was solved at 1.45 Å resolution. DmxA structure contains several features distinct from known members of haloalkane dehalogenase family: (i) a unique composition of catalytic residues; (ii) a dimeric state mediated by a disulfide bridge; and (iii) narrow tunnels connecting the enzyme active site with the surrounding solvent. The importance of narrow tunnels in such paradoxically high stability of DmxA enzyme was confirmed by computational protein design and mutagenesis experiments. MDPI 2019-10-28 /pmc/articles/PMC6920932/ /pubmed/31661858 http://dx.doi.org/10.3390/microorganisms7110498 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Chrast, Lukas Tratsiak, Katsiaryna Planas-Iglesias, Joan Daniel, Lukas Prudnikova, Tatyana Brezovsky, Jan Bednar, David Kuta Smatanova, Ivana Chaloupkova, Radka Damborsky, Jiri Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium Marinobacter sp. ELB17 |
title | Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium Marinobacter sp. ELB17 |
title_full | Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium Marinobacter sp. ELB17 |
title_fullStr | Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium Marinobacter sp. ELB17 |
title_full_unstemmed | Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium Marinobacter sp. ELB17 |
title_short | Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium Marinobacter sp. ELB17 |
title_sort | deciphering the structural basis of high thermostability of dehalogenase from psychrophilic bacterium marinobacter sp. elb17 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6920932/ https://www.ncbi.nlm.nih.gov/pubmed/31661858 http://dx.doi.org/10.3390/microorganisms7110498 |
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